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SCNpilot_cont_500_bf_scaffold_3592

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3592_1
unknown

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comp(2..205)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3592_2
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(202..741)
DNA (540bp) protein (180aa)
Putative exported protein n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4TW70_BORBO
Putative exported protein {ECO:0000313|EMBL:CCN21562.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3592_3
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(746..1570)
DNA (825bp) protein (275aa)
Putative type II secretion system protein n=7 Tax=Bordetella RepID=K0MDK9_BORPB rbh
type II secretion system protein rbh
Putative type II secretion system protein {ECO:0000313|EMBL:CCJ48076.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain Bpp5).;"
SCNpilot_cont_500_bf_scaffold_3592_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1843..3546
DNA (1704bp) protein (568aa)
gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] rbh
Gamma-glutamyltransferase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L5P9_STEMA rbh
Gamma-glutamyltransferase {ECO:0000313|EMBL:EQM87332.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
SCNpilot_cont_500_bf_scaffold_3592_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3580..5154)
DNA (1575bp) protein (525aa)
Choline/carnitine/betaine transporter n=2 Tax=Stenotrophomonas maltophilia RepID=G0K1Z4_STEMA rbh
opuD2; choline/carnitine/betaine transporter; K05020 glycine betaine transporter rbh
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:AEM52676.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_cont_500_bf_scaffold_3592_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5604..7481
DNA (1878bp) protein (626aa)
Phosphomethylpyrimidine synthase {ECO:0000255|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000255|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089}; Short=HMP-P synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMP-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMPP synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Thiamine biosynthesis protein ThiC {ECO:0000255|HAMAP-Rule:MF_00089}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria;
Phosphomethylpyrimidine synthase n=2 Tax=Stenotrophomonas maltophilia RepID=J7SYG9_STEMA rbh
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC rbh
SCNpilot_cont_500_bf_scaffold_3592_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7980..10022
DNA (2043bp) protein (681aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EFC7E6 rbh
TolB protein {ECO:0000313|EMBL:EZP44718.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
cadC; Transcriptional activator cadC rbh
Displaying 7 items

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