ggKbase home page

SCNpilot_cont_500_bf_scaffold_3932

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3932_1
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126..797
DNA (672bp) protein (224aa)
serine/threonine protein kinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031612AA rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:AJC47270.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3932_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1040..1729)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FCBB09
Uncharacterized protein {ECO:0000313|EMBL:EZP44691.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3932_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1868..2686
DNA (819bp) protein (273aa)
Short chain dehydrogenase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5THV1_STEMA rbh
Short chain dehydrogenase {ECO:0000313|EMBL:EMI48732.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
short-chain dehydrogenase/reductase SDR; K13775 citronellol/citronellal dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_3932_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2740..3615)
DNA (876bp) protein (292aa)
ion transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003093DD6 rbh
Potassium voltage-gated channel subfamily A member 2 {ECO:0000313|EMBL:EZP44687.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Ion transport protein rbh
SCNpilot_cont_500_bf_scaffold_3932_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3642..4910
DNA (1269bp) protein (423aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
argD; acetylornithine transaminase; K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] rbh
Acetylornithine aminotransferase n=2 Tax=Stenotrophomonas maltophilia RepID=B2FT38_STRMK rbh
SCNpilot_cont_500_bf_scaffold_3932_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4910..5374
DNA (465bp) protein (155aa)
Histidine triad (HIT) protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVZ1_PSEUU
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation
Histidine triad (HIT) protein {ECO:0000313|EMBL:ADV28482.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_cont_500_bf_scaffold_3932_7
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5336..5932)
DNA (597bp) protein (199aa)
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BJQ5_9XANT
Hydrolase {ECO:0000313|EMBL:KCX01624.1}; TaxID=69929 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni.;"
hypothetical protein; K07025 putative hydrolase of the HAD superfamily
SCNpilot_cont_500_bf_scaffold_3932_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6039..7343)
DNA (1305bp) protein (435aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab5555
hemL; glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
glutamate-1-semialdehyde aminotransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003805FEC rbh
SCNpilot_cont_500_bf_scaffold_3932_9
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7418..8764
DNA (1347bp) protein (449aa)
membrane dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19] rbh
Membrane dipeptidase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UN34_PSEUP rbh
Membrane dipeptidase {ECO:0000313|EMBL:AER55345.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_cont_500_bf_scaffold_3932_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8893..9258)
DNA (366bp) protein (122aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
thiamine-phosphate pyrophosphorylase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037CF68A
Displaying 10 items

View Taxonomy