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SCNpilot_cont_500_bf_scaffold_6020

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6020_1
unknown

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2..166
DNA (165bp) protein (55aa)
penicillin-binding protein 1B n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000360FADA
SCNpilot_cont_500_bf_scaffold_6020_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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174..677
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000373C753
Stenotrophomonas maltophilia strain ZBG7B contig_105, whole genome shotgun sequence {ECO:0000313|EMBL:KIP80326.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6020_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1052..2590
DNA (1539bp) protein (513aa)
putative ATP-dependent DNA helicase-like protein; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] rbh
helicase n=1 Tax=Pseudomonas geniculata RepID=UPI00029A8B3A rbh
Helicase {ECO:0000313|EMBL:AHY58032.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_500_bf_scaffold_6020_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2587..3291
DNA (705bp) protein (235aa)
putative glycoprotease; K14742 hypothetical protease [EC:3.4.-.-] rbh
glycoprotease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DFD619 rbh
Glycoprotease {ECO:0000313|EMBL:AHY58033.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_500_bf_scaffold_6020_5
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3373..3717)
DNA (345bp) protein (115aa)
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_cont_500_bf_scaffold_6020_6
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3755..4630)
DNA (876bp) protein (292aa)
phenazine antibiotic biosynthesis protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DBA23C rbh
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:KHM98256.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;"
Epimerase, PhzC/PhzF; K06998 rbh
SCNpilot_cont_500_bf_scaffold_6020_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4655..5515)
DNA (861bp) protein (287aa)
phenazine biosynthesis protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DE68A2 rbh
phenazine biosynthesis protein PhzF family; K06998 rbh
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:ADV26663.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_cont_500_bf_scaffold_6020_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5730..7643
DNA (1914bp) protein (638aa)
diaminopimelate decarboxylase (EC:2.7.2.4 4.1.1.20); K12526 bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] rbh
Aspartokinase {ECO:0000313|EMBL:CCH11653.1}; EC=2.7.2.4 {ECO:0000313|EMBL:CCH11653.1};; EC=4.1.1.20 {ECO:0000313|EMBL:CCH11653.1};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
Diaminopimelate decarboxylase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K121_STEMA rbh
SCNpilot_cont_500_bf_scaffold_6020_9
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7610..8248
DNA (639bp) protein (213aa)
Bifunctional diaminopimelate decarboxylase/aspartate kinase {ECO:0000313|EMBL:CCP40715.1}; EC=2.7.2.4 {ECO:0000313|EMBL:CCP40715.1};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
bifunctional diaminopimelate decarboxylase/aspartate kinase (EC:2.7.2.4 4.1.1.20); K12526 bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
Bifunctional diaminopimelate decarboxylase/aspartate kinase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SZF9_XANCT
SCNpilot_cont_500_bf_scaffold_6020_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8330..9685
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000318D5C3 rbh
Uncharacterized protein {ECO:0000313|EMBL:CCP10354.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_6020_11
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9666..11072
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] rbh
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZG8_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_6020_12
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11198..11995
DNA (798bp) protein (266aa)
carboxymethylenebutenolidase (EC:3.1.1.45) rbh
Dienelactone hydrolase family protein n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0E8D3_9XANT rbh
Dienelactone hydrolase {ECO:0000313|EMBL:KHL51651.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
SCNpilot_cont_500_bf_scaffold_6020_13
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12057..13055)
DNA (999bp) protein (333aa)
ispB; octaprenyl-diphosphate synthase (EC:2.5.1.- 2.5.1.1 2.5.1.10 2.5.1.29); K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] rbh
octaprenyl-diphosphate synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030765AD rbh
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:AHY59929.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_500_bf_scaffold_6020_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13233..14819
DNA (1587bp) protein (529aa)
alpha amylase; K01187 alpha-glucosidase [EC:3.2.1.20] rbh
alpha-glucosidase n=1 Tax=Pseudomonas geniculata RepID=UPI000299F5E9 rbh
Alpha amylase catalytic region {ECO:0000313|EMBL:AEM50347.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
Displaying 14 items

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