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SCNpilot_cont_500_bf_scaffold_6386

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6386_1
unknown

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comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6386_2
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(75..437)
DNA (363bp) protein (121aa)
HTH-type transcriptional repressor ytrA n=2 Tax=Xanthomonas campestris pv. translucens RepID=L0T3F8_XANCT
HTH-type transcriptional repressor ytrA {ECO:0000313|EMBL:CCP42175.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
GntR family transcriptional regulator; K07979 GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_6386_3
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(440..685)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Xanthomonas RepID=UPI0002631D48
Uncharacterized protein {ECO:0000313|EMBL:AJC44957.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCNpilot_cont_500_bf_scaffold_6386_4
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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819..1346
DNA (528bp) protein (176aa)
hypothetical protein; K00432 glutathione peroxidase [EC:1.11.1.9]
vitamin B12 ABC transporter permease n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00037E166F
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
SCNpilot_cont_500_bf_scaffold_6386_5
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1447..2406
DNA (960bp) protein (320aa)
peptidyl-prolyl cis-trans isomerase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D72492 rbh
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase 1 rbh
SCNpilot_cont_500_bf_scaffold_6386_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2429..3778
DNA (1350bp) protein (450aa)
putative nucleotide sugar dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] rbh
UDP-glucose 6-dehydrogenase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KT12_STEMA rbh
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:AHY58538.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_500_bf_scaffold_6386_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3771..4013
DNA (243bp) protein (81aa)
Uncharacterized protein n=7 Tax=Stenotrophomonas RepID=B2FLB6_STRMK
protein slyX; K03745 SlyX protein
Protein SlyX homolog {ECO:0000256|HAMAP-Rule:MF_00715}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
SCNpilot_cont_500_bf_scaffold_6386_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4031..4687
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas perforans 91-118 RepID=F0BW22_9XANT rbh
hypothetical protein
Stenotrophomonas maltophilia strain ZBG7B contig_76, whole genome shotgun sequence {ECO:0000313|EMBL:KIP81749.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
SCNpilot_cont_500_bf_scaffold_6386_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4798..6090)
DNA (1293bp) protein (431aa)
Major facilitator superfamily protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TV10_STEMA rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:EMI49436.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
major facilitator superfamily protein; K05820 MFS transporter, PPP family, 3-phenylpropionic acid transporter rbh
SCNpilot_cont_500_bf_scaffold_6386_10
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6107..7282)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0GUP5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB07701.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
putative exported amidohydrolase family protein
Displaying 10 items

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