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SCNpilot_cont_500_bf_scaffold_6474

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6474_1
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..662
DNA (660bp) protein (220aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000313|EMBL:CCP41963.1}; EC=3.1.1.61 {ECO:0000313|EMBL:CCP41963.1};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T4A0_XANCT rbh
two-component system response regulator protein rbh
SCNpilot_cont_500_bf_scaffold_6474_2
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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659..1393
DNA (735bp) protein (245aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148};; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
ung; uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27] rbh
Uracil-DNA glycosylase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z2H4_XANCT rbh
SCNpilot_cont_500_bf_scaffold_6474_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1574..2449
DNA (876bp) protein (292aa)
RNA polymerase sigma 70 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000366D051 rbh
rpoH; RNA polymerase sigma factor RpoH; K03089 RNA polymerase sigma-32 factor rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
SCNpilot_cont_500_bf_scaffold_6474_4
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2628..3029
DNA (402bp) protein (134aa)
aldehyde-activating protein n=1 Tax=Aeromonas hydrophila RepID=UPI0003684617
Uncharacterized protein {ECO:0000313|EMBL:EKB28640.1}; TaxID=1073377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SSU.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6474_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3042..4337)
DNA (1296bp) protein (432aa)
NADH dehydrogenase (ubiquinone) (EC:1.6.5.3); K03885 NADH dehydrogenase [EC:1.6.99.3] rbh
NADH dehydrogenase (Ubiquinone) {ECO:0000313|EMBL:AEM52961.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AEM52961.1};; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
NADH dehydrogenase (Ubiquinone) n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K548_STEMA rbh
SCNpilot_cont_500_bf_scaffold_6474_6
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4459..5235
DNA (777bp) protein (259aa)
Protein containing DUF88 n=2 Tax=Stenotrophomonas RepID=B8L8C7_9GAMM rbh
Protein containing DUF88 {ECO:0000313|EMBL:EED40522.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_6474_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5315..5935
DNA (621bp) protein (207aa)
glutathione S-transferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000306E3F4 rbh
Glutathione S-transferase {ECO:0000313|EMBL:AHY57507.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putative glutathione S-transferase family protein rbh
SCNpilot_cont_500_bf_scaffold_6474_8
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6034..6174)
DNA (141bp) protein (47aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003793A51
TonB-dependent outer membrane receptor precursor
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
Displaying 8 items

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