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SCNpilot_cont_500_bf_scaffold_3344_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(3128..3793)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator gacA n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMA9_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 220.0
  • Bit_score: 292
  • Evalue 2.70e-76
LuxR family transcriptional regulator {ECO:0000313|EMBL:AKC85571.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 220.0
  • Bit_score: 371
  • Evalue 6.50e-100
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 220.0
  • Bit_score: 289
  • Evalue 1.20e-75

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGCCCAGCCTGCTGATCGCCGACGACCACCCGCTGTTCCGCGCCGCGCTGCGCCAGGCCGCGGGCGAGGCGGTGGCCGACCTGCAGGTGCGCGAGGCCGAGTCGCTCGAGGGCGTGCTGGCCGCGCTGGACGCCGCGCCCGACACCGACCTGATCCTGCTCGACCTGCACATGCCCGGCAACCACGGGCTGGCCGGGCTGGCGGCGATCCGCGCCCAGCACCCGGGCGTGGCGGTGATCGTGGTGTCGGCCAATGACGACCCGCGCGTGGTGCGGCGCGCACTCGACCACGGCGCCGCCGGCTACCTGCCCAAGAGCTCGGGACTGAACGAGCTGCGCGAGGCGATCCGCAGCGTCATGGCCTGCGAGCAATGGCTGCCGGCGTCGCTGCGCGCAGCGGTGGCGCGGGCGCAGTCCTCCAGCCACGACAGCGAACTGGCCGCACGCCTGGCCAGCCTGTCGCCGCAGCAGTTCCGGGTACTGGCGCTGGTCGCCGAGGGCCTGCTCAACAAGCAGATCGCCGACCGCCTGGACGTGCAGGAGCGCACGGTCAAGGCGCACCTGTCGGCGATCTTCGAGCGCCTGGGCGTGCGCAACCGCACCCAGGCCAGCGTGGTGCTGCGCGAACTGGAACTGAGCGACCCCAGCCGGCAAAGCGACCTGTAG
PROTEIN sequence
Length: 222
MPSLLIADDHPLFRAALRQAAGEAVADLQVREAESLEGVLAALDAAPDTDLILLDLHMPGNHGLAGLAAIRAQHPGVAVIVVSANDDPRVVRRALDHGAAGYLPKSSGLNELREAIRSVMACEQWLPASLRAAVARAQSSSHDSELAARLASLSPQQFRVLALVAEGLLNKQIADRLDVQERTVKAHLSAIFERLGVRNRTQASVVLRELELSDPSRQSDL*