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SCNpilot_cont_500_bf_scaffold_3344

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3344_1
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(969..1415)
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS62485.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
id=12551779 bin=BDI tax=BDI organism_group=Betaproteobacteria
SCNpilot_cont_500_bf_scaffold_3344_2
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1544..3094
DNA (1551bp) protein (517aa)
Acriflavin resistance protein n=1 Tax=uncultured bacterium A1Q1_fos_600 RepID=L7VQG5_9BACT
Multidrug transporter AcrB {ECO:0000313|EMBL:KGM55283.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
cation/multidrug efflux pump
SCNpilot_cont_500_bf_scaffold_3344_3
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3128..3793)
DNA (666bp) protein (222aa)
Response regulator gacA n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMA9_STEMA
LuxR family transcriptional regulator {ECO:0000313|EMBL:AKC85571.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
two component LuxR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_3344_4
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3914..4711)
DNA (798bp) protein (266aa)
short-chain dehydrogenase/reductase SDR; K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:KGO97819.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
Oxidoreductase, short chain dehydrogenase/reductase family id=2528224 bin=GWF1_Xanthomonadales_69_6 species=Labrenzia alexandrii genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
SCNpilot_cont_500_bf_scaffold_3344_5
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4923..6656
DNA (1734bp) protein (578aa)
Uncharacterized protein {ECO:0000313|EMBL:AKC88107.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
Hydroxybutyrate-dimer hydrolase id=2528226 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
3HB-oligomer hydrolase (3HBOH)
SCNpilot_cont_500_bf_scaffold_3344_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6725..7324
DNA (600bp) protein (200aa)
HutD-family protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DD7FCA rbh
Protein ves {ECO:0000313|EMBL:CCP10314.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
HutD-family protein; K09975 hypothetical protein
SCNpilot_cont_500_bf_scaffold_3344_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7353..7739
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FSN4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95414.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_cont_500_bf_scaffold_3344_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7777..9384)
DNA (1608bp) protein (536aa)
flavodoxin/nitric oxide synthase; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] rbh
oxidoreductase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F5141C rbh
Sulfite reductase subunit alpha {ECO:0000313|EMBL:AHY59961.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_500_bf_scaffold_3344_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9381..10349)
DNA (969bp) protein (323aa)
thiamine biosynthesis protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EADFA5 rbh
Thiamin biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:EZP45864.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
apbE; putative thiamine biosynthesis protein; K03734 thiamine biosynthesis lipoprotein rbh
SCNpilot_cont_500_bf_scaffold_3344_10
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10465..11319)
DNA (855bp) protein (285aa)
ABC transporter permease n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E56DA0 rbh
nickel transport complex, NikM subunit, transmembrane rbh
Nickel transport complex, NikM subunit, transmembrane {ECO:0000313|EMBL:ADV26940.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_cont_500_bf_scaffold_3344_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11344..11862)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000302644D
Uncharacterized protein {ECO:0000313|EMBL:CCP10320.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3344_12
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11890..12228)
DNA (339bp) protein (113aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E34D1F
PepSY-associated TM helix domain-containing protein; K09939 hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_cont_500_bf_scaffold_3344_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12591..12902)
DNA (312bp) protein (104aa)
TonB-denpendent receptor n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003171D54
Stenotrophomonas maltophilia strain ZBG7B contig_98, whole genome shotgun sequence {ECO:0000313|EMBL:KIP80445.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
Displaying 13 items

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