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SCNpilot_cont_500_bf_scaffold_3344_10

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(10465..11319)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E56DA0 similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 289.0
  • Bit_score: 379
  • Evalue 3.70e-102
  • rbh
nickel transport complex, NikM subunit, transmembrane similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 289.0
  • Bit_score: 378
  • Evalue 1.50e-102
  • rbh
Nickel transport complex, NikM subunit, transmembrane {ECO:0000313|EMBL:ADV26940.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 289.0
  • Bit_score: 378
  • Evalue 6.90e-102

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGAAACGCACCACCCTGCTCGCCGCGCTGATCGCCGCCTCGCTCCCGTTCTCCGCCCTGGCCCACAAGCAGTGGCTGCTGCCCTCGGCCACCGTCGTCGCCGGCAACGATGCCTGGGTGACGGTCGACGCCGCGGTGTCCAACCAGCTCTATTACCCCGACCACGTGCCGATGCGCCTGGACAACGTCAGCATTGCCGCGCCCGACGGCAGCACGCTGCCGCCGCAGAATCCGGCCACCGGCAAGTACCGCAGCGTGTTCGACGTGCCGCTGGCGCAGGAAGGCACCTACCGCATCGCCAACCTCAACCGTGGCCTGTCCGCGCGCTGGGATACCCCGGAGAGCCTGGCCGCGGCCAAGGACAAGCCGGCGGCCGGTGGCATGGGCGGCGCCCGTGGCGGCTTCCTGCGCAACGCCACGGCCGAGGACCTGGCCACCAAGATCCCGAAGAACGCGCAGAACCTCCAGGTCACCGAAGGCATCGGCCGGGTGGAGACCTTCGTCACCAAGGGCAAGCCGAGCACCGTCGCGGCCACCGGCACGGGCCTGGAACTGGTGCCGGTCACCCATCCCAACGACCTGTTCGCCGGCGAGGAAGCCACGTTCAAACTGGTGGTCGACGGCCAGCCGGCCAGTGGACTGGAAGTGGAAATCGTGCGTGGCGCCACCCGCTACCGCAACGCGCAGGACGAGATCAAGGTGACCACCGGCGCCGACGGCAGCTTCAAGGTGACCTGGCCGGAGGCGGGCATGTACTGGCTGGAGACCTCGACCAGCGACGGCAAGACCAGCACGCCGCAGGCCAGGCAGCGCCGGCTGAGCTACGTCGCCACCCTGGAAGTACTGCCGCAGTAA
PROTEIN sequence
Length: 285
MKRTTLLAALIAASLPFSALAHKQWLLPSATVVAGNDAWVTVDAAVSNQLYYPDHVPMRLDNVSIAAPDGSTLPPQNPATGKYRSVFDVPLAQEGTYRIANLNRGLSARWDTPESLAAAKDKPAAGGMGGARGGFLRNATAEDLATKIPKNAQNLQVTEGIGRVETFVTKGKPSTVAATGTGLELVPVTHPNDLFAGEEATFKLVVDGQPASGLEVEIVRGATRYRNAQDEIKVTTGADGSFKVTWPEAGMYWLETSTSDGKTSTPQARQRRLSYVATLEVLPQ*