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SCNpilot_cont_500_bf_scaffold_3360_7

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(6221..7966)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 579.0
  • Bit_score: 870
  • Evalue 1.20e-249
msbA1; lipid A ABC exporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 582.0
  • Bit_score: 861
  • Evalue 1.20e-247
  • rbh
ATP-binding protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B153 similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 580.0
  • Bit_score: 870
  • Evalue 1.10e-249
  • rbh

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1746
ATGAGCCCGAACGAGACGCCCTGGCAGACCTACCGGCGCCTGCTGGTTTTCGCACAGCCCTATCGCGGGCTGCTGATGATGGCCGCGCTGGGCATGCTGATCGAAGCGGCCGCCGGTGGCGGCTTCCTGATGCTCATGAGTCCGATCACCAACAACCTGGTGAATCCCAAGGACATCAACTGGTGGATGCCGCTGGCCATCATCGGCCTGTTCCTGCTGCGCGGCGTCGCTGGATACCTGACCGACATCGGCATGGGCAAGGCCGCGCGCAGCATCGCCCGCGACCTGCGCGTGCGCGTGCTGGGCAAGTACCTGCGCCTGCCCGGGTTGCAGTTCGACAACGAGCCTGTGCCGTCGATGCTGGTGCGGCTGGGCTCGGACAGCGACCAGGTGGCGCAGGCCGCGGTCGATGCGATGAAGGTGGTCCTGCAGCAGTCCCTGCAGGTGCTGGTCTCGCTGGCGGCGATGCTGTGGTACAGCTGGCAGGTGACGCTGGCGATCTTCGTGCTGGCGCCGCCGCTGGCATGGGTGATGAACAAGGTGGCCAAGCGCTACCGGCGCATCAGCCACCGCATCCAGGAGAGCGGGGCGGAGCTGCTGCAGGCCGCGGACCAGACCCTGTCCAGCCACCAGGAAGTGAAGATCTACGGTGCGCAGCGCAGCGAGCTGGACCGCTACGGCGCGCTGGCCGATACCAACCTGAAGCTGGCGATGAAGGTGGAAGCCACGCGCAGCATCTCCTCGGCCATGGTGCAGCTGATCGGTGCGGTGGGCCTGGCGGCGCTGTTGTTGATCGCCGGGCACGAGGCCGCCGCCGGGCGCCTGTCGGTGGGCGACTTCGTCTCGATGATGCTGGCGATGATGACGATCATCCCCGCGCTCAAACAGCTGACCAACGTGCAGAACATGACCCAGCGCGGGATCGCCTCGGCGCAGCGCCTGTTCGTGGTGCTCGATGCCGCGGACGAGCCGGACACCGGCACGCGGGGCCTGCAGCGGGCCGAAGGGCTGCTGGAGTTCCGCGACGTCACCGCGCGCTACCCGGGGCAGGCGCGGCCGGCGATGGAGGGCGTCAGTTTCGTCGCGCGCCCGGGCACGGTGACCGCGATCGTCGGGCGTTCGGGCAGCGGCAAGTCCACCCTGATCAAGCTGATTCCGCGCTTCTACGAACCCGAGTCCGGGCAGATCCTGCTCGACGGCCACCCGGTACAGGAGTACCGCCTGGCCGACCTGCGCCGGCAGATCGCGCTGGTCGGCCAGCAGGTGGTGCTGTTCGATGGCAGCATCGCCCAGAACATCGCCTACGGCGAACTGCAGGACAGCAATGCCGAGCGGCTGCAGCAGGCCATCGTCGGTGCCAACGCGCGCGAGTTCGTCGAGCAGCTGCCGCAGGGCGTGGATGCCCAGGTCGGAGCCAAGGGCGGGCGCCTGTCCGGCGGCCAGCGCCAGCGCCTGGCGATCGCCCGCGCCATGCTCAAGGATGCGCCGATCCTGATCCTGGACGAAGCCACCGCGGCGCTGGACAACGAGTCCGAACGGCTGGTGCAGGATGCCCTGCAGCGGCTGATGCCCGACCGCACCACGCTGGTGATCGCGCACCGCCTGTCCACCATCGAACACGCCGACCAGGTGCTGGTGATGGACCAGGGGCGGATCGTCGAACGCGGTACCCACCAGGAGCTGTTGGCGCTGGGTGGGCTATACGAGCACCTCTACCGGATGCAGTTCCGGGAAAGGCAGGTCTGA
PROTEIN sequence
Length: 582
MSPNETPWQTYRRLLVFAQPYRGLLMMAALGMLIEAAAGGGFLMLMSPITNNLVNPKDINWWMPLAIIGLFLLRGVAGYLTDIGMGKAARSIARDLRVRVLGKYLRLPGLQFDNEPVPSMLVRLGSDSDQVAQAAVDAMKVVLQQSLQVLVSLAAMLWYSWQVTLAIFVLAPPLAWVMNKVAKRYRRISHRIQESGAELLQAADQTLSSHQEVKIYGAQRSELDRYGALADTNLKLAMKVEATRSISSAMVQLIGAVGLAALLLIAGHEAAAGRLSVGDFVSMMLAMMTIIPALKQLTNVQNMTQRGIASAQRLFVVLDAADEPDTGTRGLQRAEGLLEFRDVTARYPGQARPAMEGVSFVARPGTVTAIVGRSGSGKSTLIKLIPRFYEPESGQILLDGHPVQEYRLADLRRQIALVGQQVVLFDGSIAQNIAYGELQDSNAERLQQAIVGANAREFVEQLPQGVDAQVGAKGGRLSGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALQRLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHQELLALGGLYEHLYRMQFRERQV*