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SCNpilot_cont_500_bf_scaffold_3360

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3360_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..385)
DNA (384bp) protein (128aa)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KL57_STEMA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EQM80209.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
SCNpilot_cont_500_bf_scaffold_3360_2
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(393..2312)
DNA (1920bp) protein (640aa)
UvrABC system protein C n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z2X2_XANCT rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C rbh
SCNpilot_cont_500_bf_scaffold_3360_3
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2309..3724)
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000300BDDF rbh
RING finger protein nhl-1 {ECO:0000313|EMBL:CCP38486.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3360_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3721..4209)
DNA (489bp) protein (163aa)
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
phosphotyrosine protein phosphatase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E205F1
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:AKC85504.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
SCNpilot_cont_500_bf_scaffold_3360_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4206..4979)
DNA (774bp) protein (258aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] rbh
3-deoxy-manno-octulosonate cytidylyltransferase n=2 Tax=Xanthomonas campestris pv. translucens RepID=L0SUK3_XANCT rbh
SCNpilot_cont_500_bf_scaffold_3360_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5199..6221)
DNA (1023bp) protein (341aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] rbh
Tetraacyldisaccharide 4'-kinase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K5H6_STEMA rbh
SCNpilot_cont_500_bf_scaffold_3360_7
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6221..7966)
DNA (1746bp) protein (582aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
msbA1; lipid A ABC exporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] rbh
ATP-binding protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B153 rbh
SCNpilot_cont_500_bf_scaffold_3360_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7963..8385)
DNA (423bp) protein (141aa)
Macromelcule import protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZI55_XANCT
Biopolymer transporter {ECO:0000313|EMBL:AHY59552.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD
SCNpilot_cont_500_bf_scaffold_3360_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8392..9051)
DNA (660bp) protein (220aa)
Biopolymer transport protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TNB1_STEMA rbh
Biopolymer transport protein {ECO:0000313|EMBL:EMI50650.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
putative biopolymer transport protein; K03561 biopolymer transport protein ExbB rbh
SCNpilot_cont_500_bf_scaffold_3360_10
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9055..10614)
DNA (1560bp) protein (520aa)
Competence-related DNA-transformation transporter n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7FUE2_XANCT rbh
Competence-related DNA-transformation transporter {ECO:0000313|EMBL:ELP97125.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
competence-related DNA-transformation transporter; K02238 competence protein ComEC rbh
Displaying 10 items

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