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SCNpilot_cont_500_bf_scaffold_3749_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 1332..2414

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9F8_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 355.0
  • Bit_score: 243
  • Evalue 3.10e-61
Uncharacterized protein {ECO:0000313|EMBL:KGI76813.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 334.0
  • Bit_score: 259
  • Evalue 7.70e-66
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 355.0
  • Bit_score: 243
  • Evalue 9.80e-62

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Taxonomy

Oleiagrimonas soli → Oleiagrimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGTCCTGCCGTACCCGTTTCCTTCCGGCGCTGCCGTTCGGCCTGGCGCTGCTGCTGGCCAGTTGCACCGCGGTGGCTGCCGCCGCACCTGCGGCGATCCGCATGCCGGCCGAGCAGGCGCGCGCACTGGGCGTGCGCAACGCGGCGGCGGTCGCAGCCACCGGCATTCCGCTCGAACACCTGCCGGCGACGGTGGAACCGGCGCTGGAACGCAGCGCGGTGGTGACCGCGCCCTACGCCGGTACGGTGACCCGGGTGCTGGCGGTCGAAGGCAGCCAGGTCGCCGCCGGTGCGCCGCTGGCGCGGGTGCAAAGCCGCGAACGGATGATGCTCGAGGCCGATGCCGGGCGCGCGGCCAGCGAAGCACGCCTGGCGGCGCGGCAGGCGCGGCGCGATGCCGACCTGCTGGCCGAGGGCATCGTGCCGGCCGCGCGTGCCGAGAGCAGCCGCGCGCTGCGGGAGCAGACCGGGGCCACGCAGGCGCAGTTCGCACGGGCGCTGGCGCTGGCGCCGGCGGCCAGGGGCGGGCTGCCGGGCGAATACGAACTGCGCGCACCGCTGGCCGGGCGCGTGCTCGAACGCAAGGTGGCGCCGGGGCAGGCGCTGGAGGCGATGGCCGCCGCGTTCGTGGTGGCCGATACCTCGCAGCTGGACGTGGCCATCCGCGCGCCGGCGGCAGCACGCATGCGCCTGGCGGCCGGGCAGGTGGCGCGCATCGACGGCACCGATGCGCGCGGCCGGATCACCGCCGTGGGCAGTGCGGTCGATGGCGCCAGCCAGACCGTGCCGGTGCGCGCACGCTTCGAGGCCAGCAGCGTGCTCGTGCCGGGCCAGCCGGTGGCGGTGACACTGGAACTGCCGGCACCGCAGGGGGCGCTGGCGCTGCCGCGCGGCGCGTTGGCACGGGTGGGACGCGACAGCGTGGTGTTCGCCGCCACGACTGGCGGCTACCGGGTGGTGACCGTCGAGGTGCTGGGCGAATCGGCGACCCAGGTGGTGGTGCGCGGGCCGCTCGCGGCCGGCACGGCGGTGGCGGTGGCCGGTACCAGCGCATTGAAGGCGCTGCTGGCGGCCGGGGAGTAA
PROTEIN sequence
Length: 361
MSCRTRFLPALPFGLALLLASCTAVAAAAPAAIRMPAEQARALGVRNAAAVAATGIPLEHLPATVEPALERSAVVTAPYAGTVTRVLAVEGSQVAAGAPLARVQSRERMMLEADAGRAASEARLAARQARRDADLLAEGIVPAARAESSRALREQTGATQAQFARALALAPAARGGLPGEYELRAPLAGRVLERKVAPGQALEAMAAAFVVADTSQLDVAIRAPAAARMRLAAGQVARIDGTDARGRITAVGSAVDGASQTVPVRARFEASSVLVPGQPVAVTLELPAPQGALALPRGALARVGRDSVVFAATTGGYRVVTVEVLGESATQVVVRGPLAAGTAVAVAGTSALKALLAAGE*