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SCNpilot_cont_500_bf_scaffold_3749

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3749_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1080
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B2F87
Uncharacterized protein {ECO:0000313|EMBL:KGI76680.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
histidine kinase
SCNpilot_cont_500_bf_scaffold_3749_2
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1332..2414
DNA (1083bp) protein (361aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9F8_ALIDK
Uncharacterized protein {ECO:0000313|EMBL:KGI76813.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
RND family efflux transporter MFP subunit
SCNpilot_cont_500_bf_scaffold_3749_3
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2419..5478
DNA (3060bp) protein (1020aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349FF74
CzcA family heavy metal efflux protein rbh
CzcA family heavy metal efflux protein {ECO:0000313|EMBL:AER56090.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_cont_500_bf_scaffold_3749_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5478..5780
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1D8_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01191.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_cont_500_bf_scaffold_3749_5
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5777..7033
DNA (1257bp) protein (419aa)
Outer membrane efflux protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT27_PSEUP rbh
outer membrane efflux protein rbh
Outer membrane efflux protein {ECO:0000313|EMBL:AER56092.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_cont_500_bf_scaffold_3749_6
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7068..8369)
DNA (1302bp) protein (434aa)
Gamma-glutamylputrescine oxidase {ECO:0000313|EMBL:CCP40926.1}; EC=1.4.3.- {ECO:0000313|EMBL:CCP40926.1};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
oxidoreductase oxidoreductase; K09471 gamma-glutamylputrescine oxidase [EC:1.4.3.-] rbh
FAD-dependent oxidoreductase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030B5D34 rbh
SCNpilot_cont_500_bf_scaffold_3749_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8536..9906
DNA (1371bp) protein (457aa)
glutamate--putrescine ligase (EC:6.3.1.11); K01915 glutamine synthetase [EC:6.3.1.2] rbh
Glutamate--putrescine ligase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K4Q3_STEMA rbh
Glutamate--putrescine ligase {ECO:0000313|EMBL:EZP46311.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
SCNpilot_cont_500_bf_scaffold_3749_8
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10046..11092
DNA (1047bp) protein (349aa)
Putrescine-binding periplasmic protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUC5_PSEUU rbh
family 1 extracellular solute-binding protein; K11073 putrescine transport system substrate-binding protein rbh
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_cont_500_bf_scaffold_3749_9
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11350..12492
DNA (1143bp) protein (381aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putrescine/spermidine ABC transporter ATP-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FBFFCD rbh
potG; putative putrescine transport ATP-binding protein; K11076 putrescine transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_3749_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12489..13415
DNA (927bp) protein (309aa)
putrescine/spermidine ABC transporter permease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030B0CD4 rbh
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:AHY59604.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
binding-protein-dependent transporters inner membrane component; K11075 putrescine transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_3749_11
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13412..14257
DNA (846bp) protein (282aa)
Putrescine transport protein {ECO:0000313|EMBL:CCP40939.1}; EC=2.1.3.3 {ECO:0000313|EMBL:CCP40939.1};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
putrescine/spermidine ABC transporter permease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003129839 rbh
binding-protein-dependent transporters inner membrane component; K11074 putrescine transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_3749_12
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15005..15631
DNA (627bp) protein (209aa)
succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
succinate-semialdehyde dehdyrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F821F8
Uncharacterized protein {ECO:0000313|EMBL:GAE55958.1}; TaxID=1418095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni MAFF 301420.;"
SCNpilot_cont_500_bf_scaffold_3749_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15656..16624)
DNA (969bp) protein (323aa)
peptidase M24; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9]
Peptidase M24 n=1 Tax=mine drainage metagenome RepID=E6QK81_9ZZZZ
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SCNpilot_cont_500_bf_scaffold_3749_14
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16960..17535)
DNA (576bp) protein (192aa)
magnesium transporter CorA n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A181CA
Magnesium transporter CorA {ECO:0000313|EMBL:KCX01793.1}; TaxID=69929 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni.;"
corA; magnesium and cobalt transport protein; K03284 magnesium transporter
SCNpilot_cont_500_bf_scaffold_3749_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17915..19123)
DNA (1209bp) protein (403aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000303FC37 rbh
Membrane protein {ECO:0000313|EMBL:AHY59600.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3749_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19120..19998)
DNA (879bp) protein (293aa)
magnesium transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030FE843 rbh
putative cation transporter efflux protein component; K06189 magnesium and cobalt transporter rbh
Putative cation transporter efflux protein component {ECO:0000313|EMBL:CAQ45122.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
SCNpilot_cont_500_bf_scaffold_3749_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20068..20640)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KLT3_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EQM80162.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3749_18
unknown

Not on your lists

comp(20675..20983)
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying 18 items

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