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SCNpilot_cont_500_bf_scaffold_3768_8

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(5783..6526)

Top 3 Functional Annotations

Value Algorithm Source
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 247.0
  • Bit_score: 264
  • Evalue 2.10e-67
cobalamin-5'-phosphate synthase (EC:2.7.8.26); K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 243.0
  • Bit_score: 246
  • Evalue 7.90e-63
Cobalamin synthase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SC74_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 247.0
  • Bit_score: 264
  • Evalue 1.50e-67

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
GTGAGCGTACGCCGCCTGGTCCTGGCCATCCAGTTCCTGACCCGGCTGCCGACGCCGCAGGTCCGGGACTTCCGCGACGACGACCTCAGCCGCGCGGCGGTGTACTACCCGCTGGTCGGTGTGATCATCGGCGCGCTGCTGGCCGCGCCGTTGTACCTGCTCGGCGACCGGCCCTGGCTGGCCGGCGTGCTCACGCTGCTGGCGTGGGTGTGGGTGACCGGCGCGCTGCACCTGGACGGGCTGGGCGATGTCGCCGATGCCTTCGGCGCCGCGCACCGCGACCCGCAGCGTTTCCTTGAAGTGCTCAAGGATCCGCACATGGGCGTGTTCGGCGTGGTCACCCTGGTGATGCAGCTGCTGCTCAAGTTCGTGCTGCTGGCCGAACTGTCCGCCAGCCCGCTGTGGTACGGCATCGTGCTGGTGCCGGCGTGGGCGCGCTGGGGCACGCTGTGGTGGAGCCGGTTGTTGCCGTCGCTGCACGGTGCGGGCATGGCCGAGCGCTTTTCATGGCAGCTGAGCCTGCGCTCGATGTGGGTGTGGGCGCTGCTGCTGGCGGTGGTCACCGCCTTCGTGGCCTGGCCGCTGCTGCTTGCGCTGCCGCTGGTGGCGCTGATCGCGGCCTGGTGGCGGCGCCGGCTGGGCGGCATTTCCGGCGACTGCCTGGGCGCCAGCGTCGAGGTCACCGAAAGCCTGCTGCTGCTGGCGCTGGTGCTGCTGGGCGGGGTCGAACGGGGACTGCCGTAG
PROTEIN sequence
Length: 248
VSVRRLVLAIQFLTRLPTPQVRDFRDDDLSRAAVYYPLVGVIIGALLAAPLYLLGDRPWLAGVLTLLAWVWVTGALHLDGLGDVADAFGAAHRDPQRFLEVLKDPHMGVFGVVTLVMQLLLKFVLLAELSASPLWYGIVLVPAWARWGTLWWSRLLPSLHGAGMAERFSWQLSLRSMWVWALLLAVVTAFVAWPLLLALPLVALIAAWWRRRLGGISGDCLGASVEVTESLLLLALVLLGGVERGLP*