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SCNpilot_cont_500_bf_scaffold_3768

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3768_1
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(95..751)
DNA (657bp) protein (219aa)
uptB; maleylacetoacetate isomerase (EC:5.2.1.2); K01800 maleylacetoacetate isomerase [EC:5.2.1.2] rbh
Probable maleylacetoacetate isomerase protein {ECO:0000313|EMBL:CBA17195.1}; EC=5.2.1.2 {ECO:0000313|EMBL:CBA17195.1};; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
maleylacetoacetate isomerase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036CCE82 rbh
SCNpilot_cont_500_bf_scaffold_3768_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(898..1887)
DNA (990bp) protein (330aa)
fumarylacetoacetate hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003117E5B rbh
fumarylacetoacetate (FAA) hydrolase rbh
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:ACF50186.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_500_bf_scaffold_3768_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2368..3777
DNA (1410bp) protein (470aa)
ATP-dependent RNA helicase {ECO:0000313|EMBL:CCP09593.1}; EC=3.6.1.- {ECO:0000313|EMBL:CCP09593.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] rbh
ATP-dependent RNA helicase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CIN4_STEMA rbh
SCNpilot_cont_500_bf_scaffold_3768_4
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3888..4244
DNA (357bp) protein (119aa)
ptpS; 6-pyruvoyl tetrahydrobiopterin synthase (EC:4.2.3.12); K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003765C53
6-pyruvoyl tetrahydrobiopterin synthase {ECO:0000313|EMBL:GAE55611.1}; TaxID=1418095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni MAFF 301420.;"
SCNpilot_cont_500_bf_scaffold_3768_5
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4336..4704
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E6784F
Phasin-family protein {ECO:0000313|EMBL:EKU25349.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3768_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4912..5394
DNA (483bp) protein (161aa)
diguanylate cyclase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DAEEEE
Diguanylate cyclase {ECO:0000313|EMBL:AHY60433.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K07170 GAF domain-containing protein
SCNpilot_cont_500_bf_scaffold_3768_7
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5391..5765
DNA (375bp) protein (125aa)
Regulatory protein, TfoX family n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7FQG5_XANCT
Uncharacterized protein {ECO:0000313|EMBL:CCP39425.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
TfoX domain-containing protein
SCNpilot_cont_500_bf_scaffold_3768_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5783..6526)
DNA (744bp) protein (248aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
cobalamin-5'-phosphate synthase (EC:2.7.8.26); K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
Cobalamin synthase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SC74_9RHIZ
SCNpilot_cont_500_bf_scaffold_3768_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6523..7107)
DNA (585bp) protein (195aa)
putative phosphoglycerate mutase family; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
phosphoglycerate mutase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003817CD5
Stenotrophomonas maltophilia strain ZBG7B contig_81, whole genome shotgun sequence {ECO:0000313|EMBL:KIP81337.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
SCNpilot_cont_500_bf_scaffold_3768_10
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7104..8174)
DNA (1071bp) protein (357aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] rbh
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SUC0_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_3768_11
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8659..9621
DNA (963bp) protein (321aa)
TonB-dependent outer membrane receptor n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZI24_XANCT
TonB-dependent outer membrane receptor {ECO:0000313|EMBL:EKU25351.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
TonB-dependent outer membrane receptor protein; K02014 iron complex outermembrane recepter protein
Displaying 11 items

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