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SCNpilot_cont_500_bf_scaffold_3682_13

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(10633..11553)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L559_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 305.0
  • Bit_score: 559
  • Evalue 2.80e-156
  • rbh
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 305.0
  • Bit_score: 559
  • Evalue 4.00e-156
tRNA(Cytosine32)-2-thiocytidine synthetase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 302.0
  • Bit_score: 555
  • Evalue 7.60e-156
  • rbh

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGCACGCGATGAGTGCCGTCATTCCCCTTCCCGATCCCGCGCCGCGCGCCCGCGACCCGCGCGTGGCCGAACGCGAACACCACAAGCTGGGCAAGCGCCTGCGCCGCCAGGTCGGCCAGGCCATCGCCGACTTCGGCATGATCGAGGCCGGCGACAAGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCCTGCTGGACATCCTGCTGCAGCTGCAGAAGAAGGCGCCGGTGCCGTTCGAGCTGGTGGCGGTGAACCTGGACCAGAAGCAGCCCGGATTCCCCGAGCATGTGCTGCCGGAGTACCTGGCCGACATCGGCGTGCCGTACCACATCATCGAGCAGGACACCTATTCGGTGGTCAGCCGGGTGATCCCGGAAGGCAAGACCATGTGTTCGCTGTGCTCGCGGATGCGTCGCGGTTCGCTGTACAGCTACGCCGAGGAGAACGGCTTCACCAAGATCGCGCTGGGCCACCACCGCGACGACATGGTGGCCACGTTCTTCATGAACCTGTTCCACCACGCCAAGATCTCCGGCATGCCGCCGAAGCTGCGCAGCGACGACGGCAGGCACGTGGTGATCCGCCCGCTGGCCTACGTGCGCGAGAGCGACATCATCGACTACGCGGCGGCGCGGCGGTTCCCGATCATCCCGTGCAACCTGTGCGGCAGCCAGGAGAACCTGCAGCGCAAGCAGGTCGGGCTGATGATGAAGCAGTGGGAAAAGGACCACCCCGGGCGCATCGAGCAGATCTCGCGCGCGCTGGGCGACATCCGCCCCTCGCAGATGGCCGATCCCAACCTGTTCGACTTCATGGCGCTGGGCCGCCGCGACGACGCGCCGCTGCCCGACGCGCATGCCTGGCTGGCCGGTGGCGACCCGCAGGGCGCCCGGCAGCCGGAAGAAGACTGA
PROTEIN sequence
Length: 307
MHAMSAVIPLPDPAPRARDPRVAEREHHKLGKRLRRQVGQAIADFGMIEAGDKVMVCLSGGKDSYTLLDILLQLQKKAPVPFELVAVNLDQKQPGFPEHVLPEYLADIGVPYHIIEQDTYSVVSRVIPEGKTMCSLCSRMRRGSLYSYAEENGFTKIALGHHRDDMVATFFMNLFHHAKISGMPPKLRSDDGRHVVIRPLAYVRESDIIDYAAARRFPIIPCNLCGSQENLQRKQVGLMMKQWEKDHPGRIEQISRALGDIRPSQMADPNLFDFMALGRRDDAPLPDAHAWLAGGDPQGARQPEED*