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SCNpilot_cont_500_bf_scaffold_3682

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3682_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..647)
DNA (645bp) protein (215aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14); K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
Glycine--tRNA ligase alpha subunit n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5K9Q6_STEMA
SCNpilot_cont_500_bf_scaffold_3682_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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724..2538
DNA (1815bp) protein (605aa)
Type II secretory pathway ATPase n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C1P6_9XANT rbh
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:EZP44349.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
type II secretory pathway ATPase; K02454 general secretion pathway protein E rbh
SCNpilot_cont_500_bf_scaffold_3682_3
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2535..3254
DNA (720bp) protein (240aa)
guaA2; glutamine amidotransferase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] rbh
Strain LMCP11 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28028.1}; EC=6.3.5.2 {ECO:0000313|EMBL:KIQ28028.1};; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
glutamine amidotransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003649773 rbh
SCNpilot_cont_500_bf_scaffold_3682_4
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3404..4297
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4UP04_XANC8 rbh
hypothetical protein rbh
Hypothetical membrane protein {ECO:0000313|EMBL:CAP53664.1}; TaxID=509169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain B100).;"
SCNpilot_cont_500_bf_scaffold_3682_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4379..5122)
DNA (744bp) protein (248aa)
Sec-independent protein translocase protein TatC n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5K049_STEMA rbh
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
tatC; Twin-arginine translocation protein TatC; K03118 sec-independent protein translocase protein TatC rbh
SCNpilot_cont_500_bf_scaffold_3682_6
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5119..5559)
DNA (441bp) protein (147aa)
Sec-independent protein translocase protein TatB n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SXA5_XANCT
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
twin-arginine translocation protein subunit TatB; K03117 sec-independent protein translocase protein TatB
SCNpilot_cont_500_bf_scaffold_3682_7
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5576..5803)
DNA (228bp) protein (76aa)
Sec-independent protein translocase protein TatA n=4 Tax=Xanthomonas campestris RepID=TATA_XANC8
hypothetical protein; K03116 sec-independent protein translocase protein TatA
Sec-independent protein translocase protein TatA {ECO:0000255|HAMAP-Rule:MF_00236}; TaxID=190485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 /; NCPPB 528 / LMG 568 / P 25).;"
SCNpilot_cont_500_bf_scaffold_3682_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5879..6778)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000311B447 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP78504.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
SCNpilot_cont_500_bf_scaffold_3682_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6966..7928
DNA (963bp) protein (321aa)
ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1] rbh
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
ferrochelatase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D2894B rbh
SCNpilot_cont_500_bf_scaffold_3682_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7925..8782
DNA (858bp) protein (286aa)
hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031CBB2E rbh
Hydrolase {ECO:0000313|EMBL:AHY57093.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
alpha/beta hydrolase fold domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_3682_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8870..9658)
DNA (789bp) protein (263aa)
Uncharacterized protein n=3 Tax=Stenotrophomonas maltophilia RepID=B2FU63_STRMK rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY60890.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K07043 rbh
SCNpilot_cont_500_bf_scaffold_3682_12
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9711..10538)
DNA (828bp) protein (276aa)
recombinase RdgC n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DFA0EE rbh
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
recombination-associated protein rdgC; K03554 recombination associated protein RdgC rbh
SCNpilot_cont_500_bf_scaffold_3682_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10633..11553)
DNA (921bp) protein (307aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L559_STEMA rbh
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
tRNA(Cytosine32)-2-thiocytidine synthetase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA rbh
SCNpilot_cont_500_bf_scaffold_3682_14
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11675..12289
DNA (615bp) protein (205aa)
TonB-dependent receptor plug n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGJ9_9GAMM
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:KJV36649.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
TonB-dependent receptor plug
Displaying 14 items

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