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SCNpilot_cont_500_bf_scaffold_4463_5

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(5268..5861)

Top 3 Functional Annotations

Value Algorithm Source
lysine decarboxylase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E4C986 similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 197.0
  • Bit_score: 333
  • Evalue 1.60e-88
  • rbh
Lysine decarboxylase {ECO:0000313|EMBL:AHY59358.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 196.0
  • Bit_score: 333
  • Evalue 2.30e-88
putative lysine decarboxylase; K06966 similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 197.0
  • Bit_score: 328
  • Evalue 1.30e-87
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGAAATCCATCTGCGTCTACTGCGGCTCCAACCCCGGCGCCAATCCCCTGTACATCGAGCGCGCCACCGCACTGGGCACGCGCATCGCCCACGAAGGCCTGCGCCTGATCTACGGTGGCGGCCGCACCGGGCTGATGGGCGCGGTGGCCGATGGCGTACTGGCCGCCGGCGGCGAGGTCACCGGCGTGATCCCGCAGCACCTGGTGGACATGGAAGTCGCGCACCAGGGCGTGACCACGCTGGAAATCGTCGGCTCCATGCACGAGCGCAAATCGCGCATGTTCGACCTGTCCGATGCCTTCGTCGCCCTGCCCGGCGGCTTCGGCACCGCGGAAGAGATCTTCGAGATGCTGACCTGGCGCCAGCTCGGCATCGGCAAGAAGCCCTGCGCCTTCCTCGACGTCGACGGCTTCTACGCGCAGCTGATCGGCATGATCGACCACATGGTGGAAGAACGCTTCCTGCACCCCGAGCAGCGCCAGGACCTGTGGTACGGCGAGGATGCCGGGCAGATGCTGGCATGGATGCGCGCGTATTCGCCGGCGCAGGCGGAGAAGTGGTTCGACGAAAAACTGCGCGCAGCGTTGCGGTAA
PROTEIN sequence
Length: 198
MKSICVYCGSNPGANPLYIERATALGTRIAHEGLRLIYGGGRTGLMGAVADGVLAAGGEVTGVIPQHLVDMEVAHQGVTTLEIVGSMHERKSRMFDLSDAFVALPGGFGTAEEIFEMLTWRQLGIGKKPCAFLDVDGFYAQLIGMIDHMVEERFLHPEQRQDLWYGEDAGQMLAWMRAYSPAQAEKWFDEKLRAALR*