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SCNpilot_cont_500_bf_scaffold_4476_4

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(3214..4302)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D4E58F similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 351.0
  • Bit_score: 456
  • Evalue 1.80e-125
  • rbh
Membrane protein {ECO:0000313|EMBL:AKC86514.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 362.0
  • Bit_score: 468
  • Evalue 1.10e-128
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 351.0
  • Bit_score: 444
  • Evalue 3.80e-122
  • rbh

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGACCGCTTCCCCATCCAGGCAGGCACCCACCCGCTTTGCATCGGTCGATGCCCTGCGCGGCATCACCGTCGCGGCCATGCTGCTGGTCAACAACCCAGGCACCTGGAGCCATGTGTACGCGCCGCTGGAACACGCGCAATGGAACGGGTGCACGCCCACCGACCTGGTGTTTCCGTTCTTCCTGGTGATCGTCGGCGTGTCGATCGCGCTGGGCGTGGTGCCGCGGGTCGAGCAGGGCGCCGACCGCGCCGCGCTGACCCGCACCGTGCTGGTGCGGGCGGCGCGCATCGTCGGCCTGGGCCTGCTGCTGCACCTGCTGGCGTGGTGGTGGCTGGATCTTGCGCATTACCGTCCGCTGGGGGTGCTGCAGCGCATCGGCGTGTGCTTCGCCGCCGTCGGCGTACTGGCGATCTGGTCGCGCGCGACCACGCAGTGGGCCTGCCTGCTGCTGTTGCTGTTCGGCTACGCGGCGCTGCTGGCTGCCGGGGGTACGCTCGAGCCATGGCACAACCTGCCCAGCCGCGTGGACACCGTTCTGTTCGGCGACATGGCGTACCGGTACGACGCCGCCACCGGCCTGGGGCACGATCCCGAAGGACTGCTTTCAACGCTCGGCGCCCTGGCCTCGACCCTGATCGGCCTGCGCGCCGGTGCCCTGCTGCGCGACGGTCGCCCGGCGCGCCTGCTGCCTGCGGCCATCGTGCTGTTGGTGCTCGGGGCGCTGTGGTCGACCTGGCAGCCGCTCAACAAGAACCTCTGGACCCCGTCCTACGTGCTGTGGACCGCCGGCTGGGCGCTGGCGGCGCTGTGGCTGGCGCACATGCTCATCGACCGCGTGCAGTGGCCGCCGCTGGGGCGGCGCTTCGGCGTCAATGCGATCACCGCCTACGCCGGCTCCGGGGTGACGGTGCTGGCGCTGCTGGGCACCGGCGGCTGGGGTTGGCTGTACGGCAATGTGTTCGACCGCTGGATCACCCCGCTGGCCGGGGCCGAAGCCGCCTCGCTGGCGATGGCCATCGCCTTCGTCGCGGTCTGGTGGCTGCCGATGTGGTGGCTGGACCGGCGCCGGATCTACCTGAAGATCTAG
PROTEIN sequence
Length: 363
MTASPSRQAPTRFASVDALRGITVAAMLLVNNPGTWSHVYAPLEHAQWNGCTPTDLVFPFFLVIVGVSIALGVVPRVEQGADRAALTRTVLVRAARIVGLGLLLHLLAWWWLDLAHYRPLGVLQRIGVCFAAVGVLAIWSRATTQWACLLLLLFGYAALLAAGGTLEPWHNLPSRVDTVLFGDMAYRYDAATGLGHDPEGLLSTLGALASTLIGLRAGALLRDGRPARLLPAAIVLLVLGALWSTWQPLNKNLWTPSYVLWTAGWALAALWLAHMLIDRVQWPPLGRRFGVNAITAYAGSGVTVLALLGTGGWGWLYGNVFDRWITPLAGAEAASLAMAIAFVAVWWLPMWWLDRRRIYLKI*