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SCNpilot_cont_500_bf_scaffold_4476

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4476_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..815
DNA (813bp) protein (271aa)
lytic murein transglycosylase (EC:3.2.1.-); K08309 soluble lytic murein transglycosylase [EC:3.2.1.-]
lytic murein transglycosylase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003707574
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EZP46691.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
SCNpilot_cont_500_bf_scaffold_4476_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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812..2032
DNA (1221bp) protein (407aa)
cca; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] rbh
Multifunctional CCA protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CQX8_STEMA rbh
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_500_bf_scaffold_4476_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2071..3150)
DNA (1080bp) protein (360aa)
peptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035D6803 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY57703.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
peptidase S41
SCNpilot_cont_500_bf_scaffold_4476_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3214..4302)
DNA (1089bp) protein (363aa)
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D4E58F rbh
Membrane protein {ECO:0000313|EMBL:AKC86514.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
transmembrane protein rbh
SCNpilot_cont_500_bf_scaffold_4476_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4883..6022)
DNA (1140bp) protein (380aa)
nagA; putative N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25); K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] rbh
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KAM9_STEMA rbh
SCNpilot_cont_500_bf_scaffold_4476_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6182..7207)
DNA (1026bp) protein (342aa)
glmS; glucosamine-6-phosphate deaminase (EC:3.5.99.6); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] rbh
Glucosamine-6-phosphate deaminase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8YZR3_XANCT rbh
Stenotrophomonas maltophilia strain ZBG7B contig_50, whole genome shotgun sequence {ECO:0000313|EMBL:KIP85224.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
SCNpilot_cont_500_bf_scaffold_4476_7
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7212..8288)
DNA (1077bp) protein (359aa)
N-acetylglucosamine utilization transcriptional regulator, LacI family n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8YZP7_XANCT rbh
N-acetylglucosamine utilization transcriptional regulator, LacI family {ECO:0000313|EMBL:EKU24199.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
LacI family transcription regulator; K02529 LacI family transcriptional regulator rbh
Displaying 7 items

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