ggKbase home page

SCNpilot_cont_500_bf_scaffold_4870_11

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(11501..12718)

Top 3 Functional Annotations

Value Algorithm Source
Rare lipoprotein A n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7UTB0_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 424.0
  • Bit_score: 529
  • Evalue 2.40e-147
  • rbh
RlpA protein {ECO:0000313|EMBL:EZP46656.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 416.0
  • Bit_score: 532
  • Evalue 4.00e-148
rlpA; putative exported rare lipoprotein A; K03642 rare lipoprotein A similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 424.0
  • Bit_score: 528
  • Evalue 1.70e-147
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGAACAGCAAGTGGCTGGTCCCTGCGTTGATCGTTCTCGGGCTGGCTGCCTGCAGCAGCGCGCCACCCAGGTCCAAGTCCAGCGGCGCCGGCCATGGCGCCTCGCCCGGCAGCGTGGTGCACGGCCACGGCGGACGTCCGTCGCACTGCCCCGAGGGCTCGCCCTACGCCAGGGCGCAGGAAGACCCCACCACGCGCGGCAACTACAGTGCCGGCGGCCTGTACCGCCCGGGCGTCAAGGACACCACGCCCGACTACGTGCCTGACGTGGCCTGCATCCCCGAGCCGTTGGTCAGCGACGAGCCGCGTTCGACCGTCGGCAACCGCTCGCCGTACGTGGTGCTGGGCAAGGAATACCGGGTGATGGAGCGGGTCGACGATTACGTCGAACAGGGCACCGCGTCCTATTACGGCGCCAAGTTCCATGGGCGCCTGACCTCCAACCGCGAGGTCTATGACATGTACCAGTTCACCGCCGCGCACAAGACGCTGCCCCTGCCGAGCTTCGCCCGTGTCACCAATCTGGACAACGGCGAGTCGGTGATCGTGCGGGTCAACGACCGTGGCCCGTTCCACGACGGCCGCGTGATCGACCTGAGCTATGCCGCGGCGGTGCGGCTGGGCATCACCCAGCGCGGCACCGGCCGGGTGGAGGTGCGCGGGTTGACCCCGGGCAGCGACAGCCTGCTGGCCTCGCGGGAGACGCGTCGCCCGGCACGCGGGCGCGCCGCGGCACCGGCGGCAGGTACCGCCGCCGCGCCACCGCCCAGTCGCATGGACCAGCTGGTGCAGGCGTTGCCGGCCACGCCCGGCGCGGCGCGGACGCCGCGGCCGGCCGAAGTCCACGCCGCCGGTCCGGCTGCGCAGGCGGTGGCCGTGCAGGCATTGCCGGCTGCCCCTGATCCGTCGCCGTCGCCTTCGACGCTGCCCGTCGCCGTCGCGCCGCTGGCGGCCGCCCCGGCGCCCGACGCCGCGGCCCGCGCGCTGGGCGCGATCCTGCTGCAGGTGGCGAGCTTTTCCAGTCGCGACAACGCCTCCCGCGCCCTGGGGCAACTGAGTGCGGCCGGCATCGCCGGTGCCACGCTCAGCGACGTGGTCAGCGGCGGACGCACGCTGTGGCGCCTGCGCGTGCCCGCCGACGACGTGGCCAAGGCGGCGGAACTTGCCGGCCGCATCGCCGGTCTGGGCTTCGGCAGGCCGCAGATCGTCCGCGATTGA
PROTEIN sequence
Length: 406
MNSKWLVPALIVLGLAACSSAPPRSKSSGAGHGASPGSVVHGHGGRPSHCPEGSPYARAQEDPTTRGNYSAGGLYRPGVKDTTPDYVPDVACIPEPLVSDEPRSTVGNRSPYVVLGKEYRVMERVDDYVEQGTASYYGAKFHGRLTSNREVYDMYQFTAAHKTLPLPSFARVTNLDNGESVIVRVNDRGPFHDGRVIDLSYAAAVRLGITQRGTGRVEVRGLTPGSDSLLASRETRRPARGRAAAPAAGTAAAPPPSRMDQLVQALPATPGAARTPRPAEVHAAGPAAQAVAVQALPAAPDPSPSPSTLPVAVAPLAAAPAPDAAARALGAILLQVASFSSRDNASRALGQLSAAGIAGATLSDVVSGGRTLWRLRVPADDVAKAAELAGRIAGLGFGRPQIVRD*