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SCNpilot_cont_500_bf_scaffold_4809_7

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(4658..5746)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type multidrug transport system, permease component n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3EQL8_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 370.0
  • Bit_score: 526
  • Evalue 2.40e-146
  • rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 370.0
  • Bit_score: 525
  • Evalue 5.80e-146
ABC transporter; K09686 antibiotic transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 370.0
  • Bit_score: 522
  • Evalue 1.40e-145
  • rbh

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGAAGCTGCGCCGTCTGCTGGGGGTGATGACCAAGGAGCTGCGGCAGATGCGGCGCGACCGCATCACCCTGGCGATGATCATCGGCATCCCGGTGATGCAGCTGCTGCTGTTCGGCTACGCGATCAACACCAACCTGCGCGACCTGTCCGCCGGCTTCGCCGACCAGGCGCGGACCTCGGCCTCGCGGATGCTGGCGCGCGACATCGTGGCCAGCGGCGTGGTCTCGCCGGTGCTGGAGGCGGCGACGCCGCAGCAACTGCTCGATGCCATGCGCCGCGGCGAGATCAGCATCGGCATCGTCATCCCGCCGGACTACGAGCGCCGCCGCGCCGAAGGCCGCGAGGCGCTGCAGATCCTGGTCGACGGCAGCGACAACGCGGTCCAGAGCGCGGCGGCGCAGCTGGCGCGCATGCCGCTGGAGGGCATGGCTTTCGACCCGCTGGCGCCGGGTGCGATCGGCGTGGTCAGCTTCTACAACCCGCAGCGCAGTTCCGCGACCAACATCGTGCCGGGTCTGGTGGGGGTGATCCTGACCATGACCATGGTGCTGTTCACCGCGGTGGCGATCGTGCGCGAACGCGAGCGCGGCAACATGGAACTGTTGATCGCCACGCCGCTGACCAGTGCCGAGCTGATGGTCGGCAAGGTCGTTCCCTACGTGGCGGTCGGCCTGCTGCAGACCGGCATGGTGCTGGCACTGGGCGCATGGTTCTTCCACGTGCCGATGGCGGGCAGCCTGTGGCACGTGTTCATCGCCGCCAGCCTGCTGATCGTCGCCAACCTGGCGCTGGGCCTGTTGATCTCGACCCGCGCGCAGTCGCAGTTCCAGGCGATGCAGATGACCTTCTTCCTGTTCCTGCCGTCGATCCTGCTGTCCGGCTTCATGTTCCCGTTCTCGGGCATGCCGCGCTCGGTGCAGTGGCTGGCGGAGCTGCTGCCGCTGACCCACTTCCTGCGCCTGATCCGCGGCATGATGCTGCGCGGCGCGAGCCTGTGGGAGCTATGGCCCGACGCGCTGGCGCTGCTGGTCTTCAGCGCGGTGATGATGGCCGGCGCGATCCTGCGCTTCCGCAAGCGGCTGGACTGA
PROTEIN sequence
Length: 363
MKLRRLLGVMTKELRQMRRDRITLAMIIGIPVMQLLLFGYAINTNLRDLSAGFADQARTSASRMLARDIVASGVVSPVLEAATPQQLLDAMRRGEISIGIVIPPDYERRRAEGREALQILVDGSDNAVQSAAAQLARMPLEGMAFDPLAPGAIGVVSFYNPQRSSATNIVPGLVGVILTMTMVLFTAVAIVRERERGNMELLIATPLTSAELMVGKVVPYVAVGLLQTGMVLALGAWFFHVPMAGSLWHVFIAASLLIVANLALGLLISTRAQSQFQAMQMTFFLFLPSILLSGFMFPFSGMPRSVQWLAELLPLTHFLRLIRGMMLRGASLWELWPDALALLVFSAVMMAGAILRFRKRLD*