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SCNpilot_cont_500_bf_scaffold_4809_10

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(7660..8403)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 207.0
  • Bit_score: 234
  • Evalue 1.30e-58
TetR family transcriptional regulator {ECO:0000313|EMBL:KGM53481.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 218.0
  • Bit_score: 253
  • Evalue 3.80e-64
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 211.0
  • Bit_score: 218
  • Evalue 1.80e-54

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGAAACGTGCCCACCCCAATCCAGCCGCGGACCCCGCCGGTGCCGCCCTGCCGCAGCCTGCCGCGGCGCAGCCGGCGCCGGTTGCGCGCAAGCCGCGCAAGCCGCGCAAGCGCGCACCGGGACGGCGGCCCGGCGCCGATGCCGTCGACCTGCGCGAACGGCTGCTGGACGCGGCGTTGGCCTGCTTCGTCGCCCACGGCATCAACGCCACTTCGCTGCGCGACATCGCCCGTCGCGCCGGAGTGACGCCGGCGCTGGTCCACTACTACTTCGGCGACAAGCTGCAACTGCGGCAGGCGGTCGTGGCCGAGCGGCTGTTGCCGGTCATGGCCACGGTCCATGCCGGCGTGGCCGAGGCGGGCGACGACGTGGCGGCGACGGTGGGCGGCTTCGTCACCGGCATCACCCGCGCGGTGGTGGCCAATCCGTGGCTGCCGACATTGTGGGTACGGGAAATCCTCTGCGAAGGCGGTGCCCTGCGCGGGATGATGATCGAGCAGGCCGGGCCGCTGCTGCCGCGCCTGCTGGTGGAGCGGTTGAGCGCCGCGCAACTGGCCGGGCGACTCGCCCCGGCGCTGGATCCGCGGCTGATGGTGGTGTCGATGGTCGGGCTGACGATGTTCCCGCTGGCCAGTGCGCCGATCTGGCAGCAGGTGTTCGGTGCCGGGGAACTGGGCGCCGATGCGGTACAGCGGCACGCATTGGCGGTGTTGACGCAGGTTCTGGAGCCGGGACATGAATGA
PROTEIN sequence
Length: 248
MKRAHPNPAADPAGAALPQPAAAQPAPVARKPRKPRKRAPGRRPGADAVDLRERLLDAALACFVAHGINATSLRDIARRAGVTPALVHYYFGDKLQLRQAVVAERLLPVMATVHAGVAEAGDDVAATVGGFVTGITRAVVANPWLPTLWVREILCEGGALRGMMIEQAGPLLPRLLVERLSAAQLAGRLAPALDPRLMVVSMVGLTMFPLASAPIWQQVFGAGELGADAVQRHALAVLTQVLEPGHE*