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SCNpilot_cont_500_bf_scaffold_6006_16

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 14091..15371

Top 3 Functional Annotations

Value Algorithm Source
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 426.0
  • Bit_score: 799
  • Evalue 2.40e-228
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 426.0
  • Bit_score: 764
  • Evalue 1.50e-218
  • rbh
seryl-tRNA synthetase n=1 Tax=Pseudomonas geniculata RepID=UPI00029B1B7A similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 426.0
  • Bit_score: 767
  • Evalue 9.60e-219
  • rbh

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGCTCGATCCCGCCCTTCTCCGACAGCAGCCCGCCGAACTGGCGCAACGCCTGCGCGACACGCGCGGCTTCGAACTCGACGTGGCCGCGATCGAGTCCCTGGAAGCCGACCGCAAGCGCATCCAGGTGCGTACCCAGGAACTGCAGAACCTGCGCAACAGCCGCTCCAAGGCGATCGGCCAGGCCAAGGCCAGGGGCGAGGACGTGTCGGCGATCATGGCCGAGGTGGCCGCCTTCGCCGATGAGCTGAAGGCATCGGAAGTCCAGCTGGACGAGCTGCGCGCGCGGATCGAGGCGATCTCGATGGGCATCCCGAACCTCCCGGCCGATGACGTGCCGGCCGGGGCCGACGAGAACGACAACGTCGAGCAGTCGCGCTGGGGCACGCCGCGCACGTTCGACTTCGCGGTGCTCGACCACGTCGAGCTGGGCGCCCGCAACAAGTGGCTCGATGGCGAGACCGCGGCCAAGCTGTCCGGTTCGCGCTTCACCGTGCTGCGCGGTCCGCTCGCGCGCCTGCACCGCGCGCTGGCCCAGTTCATGCTCGACCTGCACAGCGGCGCGCACGAGTACCAGGAAACCAACGTGCCGGTGATCGTCAATGCCGACAGCCTGTACGGCACCGGTCAGCTGCCCAAGTTCGAGGAAGACATGTTCATCACCCAGTTGGGTGAGCAGAAGCGTTATCTGATCTCGACGTCGGAGATCTCGCTGACCAACATCGTGCGCGACGAGATCGTCGAGGCCGAGCGCCTGCCGCTGCGCATGACCGCGCACTCGCTGTGCTTCCGTTCCGAGGCCGGCAGCGGTGGCCGCGACGTGCGCGGCATGATCCGCCAGCACCAGTTCGAGAAGGTCGAGCTGGTCTCGATCTGCCGCCCGGAAGAAAGCGATGCCGAGCACCAGCGCATGACCCGCTGCGCCGAAACCGTGCTGGAGAAGCTGGGCCTGCCGTACCGCAAGGTGCTGCTGTGCACCGGCGACATGGGCTTCTCGGCGGTGAAGACCTACGATCTGGAAGTCTGGTTGCCGTCGCAGCAGACCTACCGCGAGATTTCCTCGTGCTCCAACTGCGGCGACTTCCAGGCGCGGCGCATGCAGGCGCGCTGGCGCAACCCCGCCACCGGCAAGCCGGAGCTGGTGCACACGCTCAACGGCTCCGGCGTGGCCGTGGGCCGGGCGATGATCGCGGTCATGGAGAACTACCAGAACGCCGACGGCTCGATCACCGTTCCCGAGGCGCTGCGCCCGTACATGGGCGGCGTGGAGCGGATCGGCTGA
PROTEIN sequence
Length: 427
MLDPALLRQQPAELAQRLRDTRGFELDVAAIESLEADRKRIQVRTQELQNLRNSRSKAIGQAKARGEDVSAIMAEVAAFADELKASEVQLDELRARIEAISMGIPNLPADDVPAGADENDNVEQSRWGTPRTFDFAVLDHVELGARNKWLDGETAAKLSGSRFTVLRGPLARLHRALAQFMLDLHSGAHEYQETNVPVIVNADSLYGTGQLPKFEEDMFITQLGEQKRYLISTSEISLTNIVRDEIVEAERLPLRMTAHSLCFRSEAGSGGRDVRGMIRQHQFEKVELVSICRPEESDAEHQRMTRCAETVLEKLGLPYRKVLLCTGDMGFSAVKTYDLEVWLPSQQTYREISSCSNCGDFQARRMQARWRNPATGKPELVHTLNGSGVAVGRAMIAVMENYQNADGSITVPEALRPYMGGVERIG*