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SCNpilot_cont_500_bf_scaffold_6006

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6006_1
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..322)
DNA (321bp) protein (107aa)
AraC family transcriptional regulator n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B71674
AraC family transcriptional regulator {ECO:0000313|EMBL:AHX14886.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
AraC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_6006_2
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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444..1661
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZIZ9_9PSED rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR67758.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_6006_3
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1672..2796
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W320_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR67757.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_6006_4
unknown

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comp(3271..3621)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6006_5
unknown

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comp(3898..4140)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6006_6
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4931..5257
DNA (327bp) protein (109aa)
TonB dependent receptor, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQL9_RHOCS
TonB-denpendent receptor {ECO:0000313|EMBL:EYR67756.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
TonB dependent receptor
SCNpilot_cont_500_bf_scaffold_6006_7
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5380..6786
DNA (1407bp) protein (469aa)
aldehyde dehydrogenase (EC:1.2.1.-); K00154 coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] rbh
Aldehyde dehydrogenase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7H9Q8_XANCT rbh
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
SCNpilot_cont_500_bf_scaffold_6006_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6984..7445)
DNA (462bp) protein (154aa)
poly(hydroxyalkanoate) granule-associated protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FB2986
Poly(Hydroxyalkanoate) granule-associated protein {ECO:0000313|EMBL:AHY58611.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
poly(hydroxyalkanoate) granule-associated protein
SCNpilot_cont_500_bf_scaffold_6006_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7537..7812)
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7UVH3_STEMA
Putative polyhydroxyalkanoic acid system protein {ECO:0000313|EMBL:EZP45493.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6006_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7932..8735
DNA (804bp) protein (268aa)
signal peptide protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003016305 rbh
Signal peptide protein {ECO:0000313|EMBL:KDE88662.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
FHA domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_6006_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8877..9962
DNA (1086bp) protein (362aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52] rbh
MFS transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031CCD7A rbh
SCNpilot_cont_500_bf_scaffold_6006_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10018..11166
DNA (1149bp) protein (383aa)
chorismate mutase; K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] rbh
Chorismate mutase {ECO:0000313|EMBL:CCP17243.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CCP17243.1};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
Chorismate mutase n=2 Tax=Stenotrophomonas maltophilia RepID=B4SP44_STRM5 rbh
SCNpilot_cont_500_bf_scaffold_6006_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11320..12570
DNA (1251bp) protein (417aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltoph
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] rbh
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F74AB1 rbh
SCNpilot_cont_500_bf_scaffold_6006_14
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12640..13185)
DNA (546bp) protein (182aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E9CC75
TonB-dependent receptor {ECO:0000313|EMBL:AHY58617.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putative TonB dependent receptor protein; K03832 periplasmic protein TonB
SCNpilot_cont_500_bf_scaffold_6006_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13316..13963)
DNA (648bp) protein (216aa)
energry transducer TonB n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DC4CBC
Energy transducer TonB {ECO:0000313|EMBL:AHY58618.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6006_16
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14091..15371
DNA (1281bp) protein (427aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] rbh
seryl-tRNA synthetase n=1 Tax=Pseudomonas geniculata RepID=UPI00029B1B7A rbh
SCNpilot_cont_500_bf_scaffold_6006_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15546..16538
DNA (993bp) protein (331aa)
Transcriptional regulator, LysR family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SNK7_STRM5 rbh
Stenotrophomonas maltophilia strain ZBG7B contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87304.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
LysR family transcriptional regulator rbh
Displaying 17 items

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