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SCNpilot_cont_500_bf_scaffold_5541_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(2877..3524)

Top 3 Functional Annotations

Value Algorithm Source
LuxR/UhpA family transcriptional regulator n=14 Tax=Xanthomonas RepID=G2LTY3_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 215.0
  • Bit_score: 335
  • Evalue 3.60e-89
  • rbh
Response regulator {ECO:0000313|EMBL:EYR69670.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 215.0
  • Bit_score: 339
  • Evalue 2.70e-90
gacA; LuxR/UhpA family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 215.0
  • Bit_score: 335
  • Evalue 1.10e-89
  • rbh

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
GTGACGATAACGGTATTTCTCATTGACGACCACGCGCTGGTGCGCACCGGTCTGCAGATGATCCTTGCCGGTGAAACCGGTATCGAGGTGGTTGGCGCCGCGGACAGCGGCGAAGCGGCCCTGCCGCAGATCCGCCGGCTGAAACCGGACGTGGTGCGCTGCGACCTGAACCTGCCGGGGCTGAGCGGGCTGGAGATCACCGAGCGCATCGTCAAGGGCGACCATGGCACCCGCGTGATCATCGTGTCGGTACTGGAAGACGGGCCGATGCCCAAGCGGCTGCTGGAAGCCGGTGCCTCCGGTTATGTCGGCAAGGGCGGTGACGCCCGCGAACTGGTGCGCGCCATCCATGACGTGGCGCTGGGTCGACGCTATCTGGCCAGCAACATCGCCCAGAACCTGGCCCTGTCCAACATAGGCGGCGACGAATCGCCGTTCGATGGTCTCTCGCCGCGCGAACTGGAAGTGGCCCTGCTGCTGGTGCAGGGGCACCGCCAGGAGGAGATCGCCCGCCGCCTCAGCCTGAGCGCCAAGACCATCAACACGCACAAGTCGCGCCTGTTCCAGAAGACCGGCGTGCACGACAACATCGCACTGGCGCGCCTGGCTGCCCAGTACGGCGTGGGCGATCCATCGAAGGCGATATGA
PROTEIN sequence
Length: 216
VTITVFLIDDHALVRTGLQMILAGETGIEVVGAADSGEAALPQIRRLKPDVVRCDLNLPGLSGLEITERIVKGDHGTRVIIVSVLEDGPMPKRLLEAGASGYVGKGGDARELVRAIHDVALGRRYLASNIAQNLALSNIGGDESPFDGLSPRELEVALLLVQGHRQEEIARRLSLSAKTINTHKSRLFQKTGVHDNIALARLAAQYGVGDPSKAI*