ggKbase home page

SCNpilot_cont_500_bf_scaffold_5581_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 1013..1369

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein required for alginate biosynthesis n=1 Tax=Polaromonas sp. CF318 RepID=J3CSR8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 115.0
  • Bit_score: 153
  • Evalue 1.10e-34
Putative membrane protein required for alginate biosynthesis {ECO:0000313|EMBL:EJL77759.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 115.0
  • Bit_score: 153
  • Evalue 1.50e-34
membrane protein GlpM; K02442 membrane protein GlpM similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 115.0
  • Bit_score: 151
  • Evalue 2.20e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Polaromonas sp. CF318 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGATTCCCCTGTTCCTGAAATCGCTGCTGGGCGCCCTGGCGGTACTGCTGATCGCGCTGCTGGCCAGGTCGAAGAGTTTCTTCATCGCCGGCCTGGTGCCGCTGTTTCCCACTTTCGCGCTGATCGCCCACTACATCGTCGGCAGCCAGCGCTCCGGCGCCGACCTGCAGAAAACCGCGCTGTTCGGGCTGTGGTCGCTGTTCCCCTATGCCGGCTACCTGGTGGCGGTGTATTTCGGCAGCGTGCGCTGGCCGCTGGCGGTGACCCTGGGCGTGGCCACGGCGGTCTGGGTGCTCATGGCGCTGGCGATGATCGTGCTGTGGGCACGGCTGCATCCCGCCGCCGCGGGAGCCTGA
PROTEIN sequence
Length: 119
MIPLFLKSLLGALAVLLIALLARSKSFFIAGLVPLFPTFALIAHYIVGSQRSGADLQKTALFGLWSLFPYAGYLVAVYFGSVRWPLAVTLGVATAVWVLMALAMIVLWARLHPAAAGA*