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SCNpilot_cont_500_bf_scaffold_5581

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5581_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..482)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003113D44
Uncharacterized protein {ECO:0000313|EMBL:AHY59620.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5581_2
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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599..958
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KV53_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGI76328.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
hypothetical membrane protein; K08987 putative membrane protein
SCNpilot_cont_500_bf_scaffold_5581_3
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1013..1369
DNA (357bp) protein (119aa)
Putative membrane protein required for alginate biosynthesis n=1 Tax=Polaromonas sp. CF318 RepID=J3CSR8_9BURK
Putative membrane protein required for alginate biosynthesis {ECO:0000313|EMBL:EJL77759.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
membrane protein GlpM; K02442 membrane protein GlpM
SCNpilot_cont_500_bf_scaffold_5581_4
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1475..2374
DNA (900bp) protein (300aa)
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] rbh
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTP8_PSEUP rbh
SCNpilot_cont_500_bf_scaffold_5581_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2450..2884)
DNA (435bp) protein (145aa)
Peptidase propeptide and ypeb domain-containing protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYH0_9GAMM
Peptidase propeptide and ypeb domain-containing protein {ECO:0000313|EMBL:EIL92261.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
propeptide PepSY amd peptidase M4
SCNpilot_cont_500_bf_scaffold_5581_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3099..4535
DNA (1437bp) protein (479aa)
MFS transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036BBC8F rbh
MFS transporter {ECO:0000313|EMBL:AHY59617.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Major facilitator superfamily (MFS_1) transporter rbh
SCNpilot_cont_500_bf_scaffold_5581_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4684..5145)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E0BD9A
Bacteriohemerythrin {ECO:0000256|HAMAP-Rule:MF_00556}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Hemerythrin-like protein PA1673
SCNpilot_cont_500_bf_scaffold_5581_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5233..6543)
DNA (1311bp) protein (437aa)
Response regulator pleD {ECO:0000313|EMBL:CCP10779.1}; EC=2.7.7.65 {ECO:0000313|EMBL:CCP10779.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
diguanylate cyclase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EB8E2D rbh
response regulator receiver modulated diguanylate cyclase rbh
SCNpilot_cont_500_bf_scaffold_5581_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6703..6972
DNA (270bp) protein (90aa)
Winged helix family two component transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WXV7_9GAMM
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:EIL96715.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
winged helix family two component transcriptional regulator
Displaying 9 items

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