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SCNpilot_cont_500_bf_scaffold_5706_10

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 11178..12602

Top 3 Functional Annotations

Value Algorithm Source
hrpA; ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 474.0
  • Bit_score: 750
  • Evalue 4.20e-214
DEAD/DEAH box helicase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A04487 similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 474.0
  • Bit_score: 758
  • Evalue 3.80e-216
ATP-dependent helicase HrpA {ECO:0000313|EMBL:AEL08179.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 474.0
  • Bit_score: 750
  • Evalue 1.90e-213

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Taxonomy

Xanthomonas campestris → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1425
TTGCCGCCCGGGCAGCAGCGCACGCTGCGCTGGTCGCTGACCGACCTGCTGCCGGGCGAAGGCAGCGAGCAGGAGCGGTATCCGAAATATTTCGCGCTGGGCGATGCGCGGCTGGCGATGCATTACCGCTTCGAGCCCGGCGCGGCGGACGACGGCGTCACCCTCGACGTGCCGCTGCACCTGCTCAACGCGCTGGACCCGGCGCGGCTGTCATGGCTGGCGCCGGGCTTCGTCGCCGACAAGGCCGCGGCACTGATCCGCAGCCTGCCCAAGGCGATGCGCCGCAACTACGTGCCGGCACCGGACTTCGCCCGCGCCTTCTTCGAGGCATGGCCGCAGCCCTCGGCCGACGACATCCGCGGTGAACTTGCGCGGTTCCTGTCGAAAGCCACCGGCGCGGCGGTGGCCGCCACCGATTTCGACGAGGCGGCGCTGGAGCCGCACCTGCGCATGAACCTGCGCCTGGCCGATGCCGAGGGCCGGCTGCTGGCGATGTCGCGCGATCTCGATGCGCTGCGCGCACGCTTCGGCGAGCGCGCCGGGCAGGCGTTCGCGGCGCGTGCCGGCAAGGCGCTGGCTGCCGAGGGGCTGCGCGAATTCCCGGCCGGCGCCATTCCCGGGCAGGTGCCCGGCGAAGCCGGCGTGCCGGCGTATCCGGCGCTGGTCGATACCGGCGAGACGGCGGCGCTGCGCATCTTCGCCGACCGCAACGCGGCGCTGCTGGCGCATCCGGGCGGGGTGCGGCGCCTGCTGGAAATCGCCCTGGCCGACAAGGTCAAGCAGGCCCGCAAGCAGTTGCCGGTATCGCCCAAGACCGGGTTGCTGTATGCGGCCATCGAATCGCAGGAAAGGCTGCGCGGCGACCTGGTCGATGCGGCCATGAACGCGGTGCTGGCCGATGGCCTGGGCGAGATCCGCTCGGCGGAGGCTTTCGAGCTGCGCCGTGCCGATGCCGGCAAGCGCCTGTTCGGCGAAGCGATGGAGCGGCTGCGCCTGGCCGAGACCATCCTCGGCCTGGTGGGCGAGCTCAAGCCGCTGCTGGAAGCGCCGTTGATGGGCTGGGCGCGCGGCAACCTCGACGACATGGAACGGCAGCTGGCGTCGCTGGTCCACGCCGGCTTCCTGCGACAGACCCCCGCCGACGCGCTGGCGCAGTTCCCGCGCTACCTGAAGGCGATGATCCTGCGCAGCGAACGCGCCAAGCGCGACCCGCCGCGCGACCAGGCGCGCATGCTTGAGCTCAAGCCCTTCGTCGATGCGCTGGAGGAGGCGCGGCTGCAGGGTCAGGCCGCGCACCCGCAATGGTCGGCGCTGCGCTGGGACATCGAGGAACTGCGGGTATCGCTGTTCGCGCAGGAACTGGGCTTCCGCTCCGGCATCTCGCCGAAGAAGCTGGCGCAGCGGGTCGCTTCACTGCGTGGTTGA
PROTEIN sequence
Length: 475
LPPGQQRTLRWSLTDLLPGEGSEQERYPKYFALGDARLAMHYRFEPGAADDGVTLDVPLHLLNALDPARLSWLAPGFVADKAAALIRSLPKAMRRNYVPAPDFARAFFEAWPQPSADDIRGELARFLSKATGAAVAATDFDEAALEPHLRMNLRLADAEGRLLAMSRDLDALRARFGERAGQAFAARAGKALAAEGLREFPAGAIPGQVPGEAGVPAYPALVDTGETAALRIFADRNAALLAHPGGVRRLLEIALADKVKQARKQLPVSPKTGLLYAAIESQERLRGDLVDAAMNAVLADGLGEIRSAEAFELRRADAGKRLFGEAMERLRLAETILGLVGELKPLLEAPLMGWARGNLDDMERQLASLVHAGFLRQTPADALAQFPRYLKAMILRSERAKRDPPRDQARMLELKPFVDALEEARLQGQAAHPQWSALRWDIEELRVSLFAQELGFRSGISPKKLAQRVASLRG*