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SCNpilot_cont_500_bf_scaffold_6961_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 1160..1540

Top 3 Functional Annotations

Value Algorithm Source
signal recognition particle n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F6A8F5 similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 126.0
  • Bit_score: 232
  • Evalue 3.30e-58
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 126.0
  • Bit_score: 230
  • Evalue 1.80e-57
ffh; putative signal recognition protein (signal recognition particle-like); K03106 signal recognition particle subunit SRP54 similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 126.0
  • Bit_score: 221
  • Evalue 1.80e-55

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGCGCGACCAGCTCGAGCAGATGCAGAACATGGGCGGCATCGGCGGCTTGATGGACAAGCTGCCGGGCCTGGGGCAGATCCCCGAGCACCTCAAGCAGCAGGTGCAGCAGAGCAGGGAAGTGCCGCGCATGATCGCCATCATCAATTCGATGACCAAGAAGGAACGCCGCAACCCGGGCCTGCTCAACGGCTCGCGCCGGGCGCGGATCGCACGCGGCTCCGGCACCCAGCCGGCCGACGTCAACAAGCTGATGAAGCAGTACATGCAGATGGAAAAGATGATGGGCAAGCTGTCCGGCGGCGGCATGAAGGGCATGCTGCGCAACATGAAGGGCATGTTCGGCGCGATGGGCGGCAAGGGCGGCCTGCCGTTCCGCTGA
PROTEIN sequence
Length: 127
MRDQLEQMQNMGGIGGLMDKLPGLGQIPEHLKQQVQQSREVPRMIAIINSMTKKERRNPGLLNGSRRARIARGSGTQPADVNKLMKQYMQMEKMMGKLSGGGMKGMLRNMKGMFGAMGGKGGLPFR*