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SCNpilot_cont_500_bf_scaffold_9237_8

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 4389..5237

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 276.0
  • Bit_score: 431
  • Evalue 8.80e-118
aroE; shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 278.0
  • Bit_score: 428
  • Evalue 1.30e-117
  • rbh
shikimate 5-dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DBDA25 similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 278.0
  • Bit_score: 434
  • Evalue 7.40e-119
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGAGCGTTGCCCGCTACGCCGTCTTTGGCCACCCCATCGCCCATTCGCAGTCGCCGCGCATCCAGGCCGCCTTCGCCAAGGCGCAGGGAATCGAGATCGATTACCGCGCCATCGACGCGACGCCGCAGGATTTCGCCGCGGCGCTGGACGCCTTCGCCGCCGACGGCGGGGTGGGCGCCAACGTCACCCTGCCGCACAAGGAAGCGGCGTTCGCGCTGTGCGCCACCACCACCTCGCGCGCGCAGCGTGCCGGCGCGGTCAACACCCTGCTGCGCAAGGGCGAACGCTGGCATGGCGACAACACCGACGGCATCGGCCTGGTGCGCGACCTCACCGGCCGCAACGGGCTGGACCTGCGCGGCCGCCGCGTGCTGCTGCTCGGCGCCGGTGGCGCCGCGCGCGGCGTGGCCCCGGCGCTGCTCGACGCCGGCATCCTCGAACTGGTGGTGGCCAACCGCACCCCGGAGCGTGCCGACGCCCTGGTCGATGCGATGAGCGAGCCGGGCCGCGTCATCTCGGCCTATTGGGACGCGCTGCGCGAGCAGGGCGACTTCGAGCTGATCATCAACGCCACTTCCGCCGGTCGTGGCGACGGTGCGGTTTTCAACCTGCCGCTGTCGCTGGTCAACAGCCTGACCACCGCGGTGGACCTGAACTACGGCGAGGCGGCGATCCCGTTCCTGGCCTGGGCGCGCGCGGCCGGGTGCCGCAATGAGTTCGACGGGCTCGGCATGCTGGTCGAACAGGCCGCCGAGAGCTTCCAGCAGTGGCATGGCGTGCGCCCTGAAACCGACGCGGTCTACGCCGCGCTGCGCGAACGCGCCGCCACCCTGGTCACCGCGGACTGA
PROTEIN sequence
Length: 283
MSVARYAVFGHPIAHSQSPRIQAAFAKAQGIEIDYRAIDATPQDFAAALDAFAADGGVGANVTLPHKEAAFALCATTTSRAQRAGAVNTLLRKGERWHGDNTDGIGLVRDLTGRNGLDLRGRRVLLLGAGGAARGVAPALLDAGILELVVANRTPERADALVDAMSEPGRVISAYWDALREQGDFELIINATSAGRGDGAVFNLPLSLVNSLTTAVDLNYGEAAIPFLAWARAAGCRNEFDGLGMLVEQAAESFQQWHGVRPETDAVYAALRERAATLVTAD*