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SCNpilot_cont_500_bf_scaffold_9237

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9237_1
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..110
DNA (108bp) protein (36aa)
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003AA3099
Uncharacterized protein {ECO:0000313|EMBL:KHL54764.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
SCNpilot_cont_500_bf_scaffold_9237_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(213..635)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003042A2C
Uncharacterized protein {ECO:0000313|EMBL:AHY57221.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9237_3
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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767..1015
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7Z7Q7_9XANT
Uncharacterized protein {ECO:0000313|EMBL:ETC84453.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9237_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1095..2009
DNA (915bp) protein (305aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D64C3F rbh
Bestrophin {ECO:0000313|EMBL:AHY57223.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K08994 putative membrane protein rbh
SCNpilot_cont_500_bf_scaffold_9237_5
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2036..3025
DNA (990bp) protein (330aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
delta-aminolevulinic acid dehydratase (EC:4.2.1.24) rbh
Delta-aminolevulinic acid dehydratase n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7Z749_9XANT rbh
SCNpilot_cont_500_bf_scaffold_9237_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3027..3329
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F1C995
Uncharacterized protein {ECO:0000313|EMBL:AHY57225.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_500_bf_scaffold_9237_7
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3508..4335)
DNA (828bp) protein (276aa)
TolB-like protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000363F7FD rbh
TolB-like protein {ECO:0000313|EMBL:AJC46755.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_9237_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4389..5237
DNA (849bp) protein (283aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
aroE; shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] rbh
shikimate 5-dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DBDA25 rbh
SCNpilot_cont_500_bf_scaffold_9237_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5243..5596
DNA (354bp) protein (118aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003125F85
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF53554.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_500_bf_scaffold_9237_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5670..6995
DNA (1326bp) protein (442aa)
dinG; ATP-dependent DNA helicase DinG; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] rbh
ATP-dependent DNA helicase DinG n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TG36_STEMA rbh
ATP-dependent DNA helicase DinG {ECO:0000313|EMBL:EMI48115.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
SCNpilot_cont_500_bf_scaffold_9237_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6950..7699
DNA (750bp) protein (250aa)
dinG; ATP-dependent DNA helicase DinG; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12]
ATP-dependent DNA helicase DinG n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D7BF99
ATP-dependent DNA helicase DinG {ECO:0000313|EMBL:AHY57231.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_500_bf_scaffold_9237_12

Not on your lists

comp(7763..8026)
DNA (264bp) protein (88aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B7VE80_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAS02934.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_500_bf_scaffold_9237_13
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8091..8678)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3A8J2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO39916.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9237_14
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8775..10154)
DNA (1380bp) protein (460aa)
amino acid transporter n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000379DDFA rbh
Amino acid transporter {ECO:0000313|EMBL:AJC48137.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
amino acid transporter; K03293 amino acid transporter, AAT family rbh
SCNpilot_cont_500_bf_scaffold_9237_15
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10400..11572
DNA (1173bp) protein (391aa)
acyl-CoA dehydrogenase domain-containing protein; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] rbh
acyl-CoA dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EA8416 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KGM55881.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
Displaying 15 items

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