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SCNpilot_cont_500_bf_scaffold_9979_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 230..787

Top 3 Functional Annotations

Value Algorithm Source
rmlC; putative DTDP-dehydrorhamnose 3,5-epimerase; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 185.0
  • Bit_score: 345
  • Evalue 9.40e-93
  • rbh
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Pseudomonas geniculata RepID=UPI00029B3000 similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 185.0
  • Bit_score: 348
  • Evalue 3.50e-93
  • rbh
Stenotrophomonas maltophilia strain ZBG7B contig_37, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86135.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 184.0
  • Bit_score: 346
  • Evalue 3.20e-92

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGAAGGTCATCGAAACCTCGCTGCCGGGCTGCGTGGTGATCGAGCCGGCGGTGTTCGGCGACGCCCGCGGCATGTTCTTCGAGACCTGGAACGCCGAGCGCTTCGCCGCGCACGGGCTGCCGACGAAGTTCGTGCAGAGCAACGTCTCCACCTCGGTCAAGGGCGTGCTGCGTGGCCTGCATTACCAGTGGCCGCGGCCGCAGGGCAAGCTGGTCAGCGTGCTCGAGGGCGAGGTCTATGACGTGGCGGTGGACATCCGCCGCGGCTCGCCGACTTTCGGGCGCTGGGAAGCGGTGCTGCTCAGCGCCGGGAACCACCGCCAGTTCTGGATCCCCGAAGGCTTCGCGCACGGTTTCGCGGTGCTCTCCGAGCGGGCGGTGTTCAGCTATCTGTGCACCGATGTCTACGTCAAGGAAGCCGATGCCGGCGTGCGCTGGAACGATGCCGACATCGCCGTCGACTGGCCGATCGGCGCGCCGACGCTGTCGGCCAAGGACGAGAGCGCGCCGTTCCTGGCGGAGATCGCCGAGGAGCGGCTGCCGGTGTACGTGCCATGA
PROTEIN sequence
Length: 186
MKVIETSLPGCVVIEPAVFGDARGMFFETWNAERFAAHGLPTKFVQSNVSTSVKGVLRGLHYQWPRPQGKLVSVLEGEVYDVAVDIRRGSPTFGRWEAVLLSAGNHRQFWIPEGFAHGFAVLSERAVFSYLCTDVYVKEADAGVRWNDADIAVDWPIGAPTLSAKDESAPFLAEIAEERLPVYVP*