ggKbase home page

SCNpilot_cont_500_bf_scaffold_9979

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9979_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..233
DNA (231bp) protein (77aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
rmlA; putative glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
glucose-1-phosphate thymidylyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000314CC3D
SCNpilot_cont_500_bf_scaffold_9979_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

230..787
DNA (558bp) protein (186aa)
rmlC; putative DTDP-dehydrorhamnose 3,5-epimerase; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] rbh
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Pseudomonas geniculata RepID=UPI00029B3000 rbh
Stenotrophomonas maltophilia strain ZBG7B contig_37, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86135.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
SCNpilot_cont_500_bf_scaffold_9979_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

784..1701
DNA (918bp) protein (306aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EZP45311.1}; EC=1.1.1.133 {ECO:0000313|EMBL:EZP45311.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
rfbD; putative dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] rbh
Putative dTDP-4-dehydrorhamnose reductase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FMQ0_STRMK rbh
SCNpilot_cont_500_bf_scaffold_9979_4
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1904..3640
DNA (1737bp) protein (579aa)
Putative type II secretion protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4X177_PSEDE rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN52002.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
putative type II secretion protein rbh
SCNpilot_cont_500_bf_scaffold_9979_5
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3633..4457
DNA (825bp) protein (275aa)
Type II secretion system protein n=1 Tax=Beggiatoa sp. PS RepID=A7BY32_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFN52003.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
type II secretion system protein; K02455 general secretion pathway protein F
Displaying 5 items

View Taxonomy