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SCNpilot_cont_500_bf_scaffold_10865_5

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(3180..4169)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase (EC:3.2.1.17); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 329.0
  • Bit_score: 546
  • Evalue 4.90e-153
  • rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 329.0
  • Bit_score: 546
  • Evalue 2.20e-152
Pseudouridine synthase n=2 Tax=Stenotrophomonas maltophilia RepID=B4SPV7_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 329.0
  • Bit_score: 546
  • Evalue 1.60e-152
  • rbh

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGACTGACTCCGAAGACCGCCGCATACCGCCTGCGGGCAAATCCAGCGTGCGCCTGATCAAGGTTCCGGAAGACCGGGCCGGGCAGCGGCTGGACAACTTCCTGCTCGGCCAGCTCAAGGGCGCCCCGCGCAGCCTGGTCTACAAACTGGTGCGCAGCGGCCAGGTGCGGGTCAATGGCGGCCGAGCCAAGGCCGAGCGCAAGCTGGAGGCGGGCGAGGAGGTGCGCGTGCCGCCGGTCAATCTCGCCGAGGTCGGAGACAAGGCGCCACCGCCGGCCGGCTTCCTGCAGCGCATGGAGCAGGCCATCGTGTTCGAGGACGCGCGGCTGCTGGTCATCAACAAGCCTTCCGGGGTGGCCAGCCATGGCGGCAGCGGCATCAGCCATGGCGCGATCGAAACCATGCGCGCCCTGCGTCCGAACCAGGGGCTGGAGCTGGTCCACCGCCTGGATCGCGACACCTCGGGGCTGCTGGTCATGGCCAAGAAGCGCTCGGCGCTGTCCGAGCTGCAGGCGCTGCTGCGCGAGGACCACGACGGCACCGGGCCCGGCGGCATCCGCAAGCGCTACCTGACCCTGCTGGTCGGGCGCATGCCCGATGGGGTGATGAGCGTGGATGCGCCGCTGCACGTGGGCCTGCGCCAGGGGGGCGAACGCCATGTGCAGGTGAATGCGGCCGGCAAGCCGTCACTGAGCCATTTCAGGGTGCTGGAGCGGCGCGGCGGTCATTCGTACTGCGAGGTGAAGATCGATACCGGGCGTACCCACCAGATCCGCGTGCATGCCCAGCACATCGGTCATCCGGTCGCCGGTGACGACAAGTACGGCGATCCTGCGGTCAACAAGCGGTTTCGCGAGCAGATCGGGCTGAAGCGGCTGTTCCTTCACGCCGCCTCGCTGGAGTTTGCGCTCGATGGCGGCAAGGTGCCCTATGTGCTCAACGCACCGCTGGCGCCGGAACTGGCCGAGGCGCTGGACCGGTTGCGCTGA
PROTEIN sequence
Length: 330
MTDSEDRRIPPAGKSSVRLIKVPEDRAGQRLDNFLLGQLKGAPRSLVYKLVRSGQVRVNGGRAKAERKLEAGEEVRVPPVNLAEVGDKAPPPAGFLQRMEQAIVFEDARLLVINKPSGVASHGGSGISHGAIETMRALRPNQGLELVHRLDRDTSGLLVMAKKRSALSELQALLREDHDGTGPGGIRKRYLTLLVGRMPDGVMSVDAPLHVGLRQGGERHVQVNAAGKPSLSHFRVLERRGGHSYCEVKIDTGRTHQIRVHAQHIGHPVAGDDKYGDPAVNKRFREQIGLKRLFLHAASLEFALDGGKVPYVLNAPLAPELAEALDRLR*