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SCNpilot_cont_500_bf_scaffold_10865

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_10865_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1636)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JVP5_STEMA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEM52009.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_cont_500_bf_scaffold_10865_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1649..2248)
DNA (600bp) protein (200aa)
Fe/S biogenesis protein NfuA n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B62F29 rbh
Fe/S biogenesis protein NfuA {ECO:0000256|HAMAP-Rule:MF_01637, ECO:0000256|SAAS:SAAS00035357}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
putative iron-sulphur cluster/NifU like protein; K07400 Fe/S biogenesis protein NfuA rbh
SCNpilot_cont_500_bf_scaffold_10865_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2339..2683
DNA (345bp) protein (115aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
phhB; pterin-4-alpha-carbinolamine dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000301DC78
SCNpilot_cont_500_bf_scaffold_10865_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2685..3098
DNA (414bp) protein (138aa)
TonB dependent receptor protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036E205C
Ferric siderophore transport system, periplasmic binding protein TonB {ECO:0000313|EMBL:EZP42440.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
putative TonB dependent receptor protein; K03832 periplasmic protein TonB
SCNpilot_cont_500_bf_scaffold_10865_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3180..4169)
DNA (990bp) protein (330aa)
RluA family pseudouridine synthase (EC:3.2.1.17); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
Pseudouridine synthase n=2 Tax=Stenotrophomonas maltophilia RepID=B4SPV7_STRM5 rbh
SCNpilot_cont_500_bf_scaffold_10865_6
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4417..4818
DNA (402bp) protein (134aa)
rne; ribonuclease E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12]
Ribonuclease E n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HBG7_XANCT
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
Displaying 6 items

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