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SCNpilot_cont_500_bf_scaffold_11765_6

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 4893..5576

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=12 Tax=Stenotrophomonas RepID=B4ST91_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 227.0
  • Bit_score: 450
  • Evalue 1.40e-123
  • rbh
DNA-binding response regulator; K07660 two-component system, OmpR family, response regulator PhoP similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 227.0
  • Bit_score: 450
  • Evalue 4.30e-124
  • rbh
DNA-binding response regulator {ECO:0000313|EMBL:EZP42947.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 227.0
  • Bit_score: 450
  • Evalue 1.90e-123

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGCGTATCCTTCTGGTCGAAGACGAAGCCCCGCTGCGCGAGACCCTGGCAGCCCGGCTCAAGCGCGAGGGCTTTGCCGTCGATGCCGCGCAGGACGGAGAGGAAGGGCTGTACATGGGACGCGAGGTGCCGTTCGATGTCGGCATCATCGATCTGGGCCTGCCCAAGATGTCGGGCATGGAGCTGATCAAGGCGCTGCGCGACGAGGGCAAGAAGTTCCCGGTGCTGATCCTGACCGCCCGTTCCAGCTGGCAGGACAAGGTCGAGGGCCTGAAGCAGGGCGCCGACGACTACCTGGTCAAGCCGTTCCACGTCGAAGAGCTGCTGGCCCGCGTCAACGCGCTGCTGCGCCGCGCCGCCGGCTGGTCCAAGCCGACGCTGGAGTGCGGCCCGGTGGCGCTGGACCTGGCCGCGCAGACGGTCAGCGTGGCCGGCAGCAACGTCGACCTGACCAGCTACGAATACAAGGTGCTCGAGTACCTGATGATGCATGCCGGTGAGCTGGTCTCGAAGGCCGACCTCACCGAGCACATCTACCAGCAGGACTTCGACCGCGATTCGAACGTGCTGGAAGTGTTCATCGGCCGCCTGCGCAAGAAGCTGGACCCGGACGGCGAGCTGAAGCCGATCGAAACCGTGCGCGGCCGTGGTTACCGCTTCGCCATTCCGCGCAACGAGGGCTGA
PROTEIN sequence
Length: 228
MRILLVEDEAPLRETLAARLKREGFAVDAAQDGEEGLYMGREVPFDVGIIDLGLPKMSGMELIKALRDEGKKFPVLILTARSSWQDKVEGLKQGADDYLVKPFHVEELLARVNALLRRAAGWSKPTLECGPVALDLAAQTVSVAGSNVDLTSYEYKVLEYLMMHAGELVSKADLTEHIYQQDFDRDSNVLEVFIGRLRKKLDPDGELKPIETVRGRGYRFAIPRNEG*