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SCNpilot_cont_500_bf_scaffold_25105_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 52..681

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=11 Tax=Stenotrophomonas RepID=RS4_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 209.0
  • Bit_score: 401
  • Evalue 5.20e-109
  • rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 209.0
  • Bit_score: 402
  • Evalue 3.30e-109
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 97.1
  • Coverage: 209.0
  • Bit_score: 401
  • Evalue 1.60e-109
  • rbh

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGCTCGTTATATCGGTCCTACCTGTAAGCTCGCCCGTCGCGAAGGCGCCGACCTGTCGCTGAAGAGCCCGGCCCGTGCGCTGGACTCCAAGTGCAAGCTGGAGCAGAAGCCCGGCCAGCACGGCGCCACCGCCCGCAAGGGCAAGCTGTCCGACTACGCCACCCAGCTGCGCGAGAAGCAGAAGGTCAAGCGCATCTACGGTCTGCTGGAGCGCCAGTTCCGCAACTACTACAAGAAGGCCTCGACCAAGAAGGGCAACACCGGCGAGAACCTGCTGCAGCTGCTGGAAACCCGCCTGGACAACGTCGTCTACCGCATGGGCTTCGCCGTGACCCGTCCGGCCGCGCGCCAGCTGGTCTCGCACCGCGGCGTCACCGTGAACGGCAAGTCGGTCAACCTGGCCTCGTACCAGGTCAAGGCCGGCGACGCGATCGCCCTGTCGGAAAAGGCTGCCAAGCAGCTGCGTGTCCAGGAAGCCCTGACCATCGCCGAACAGCATGACCTGAGCCCGTCGTGGGTGGAAGTCGATTCGAAGAAGTTCAGCGGCGTGTTCAAGGCCGTGCCGGATCGCGCCGACCTGCCGGCGGACATCAACGAAGCGCTGATCGTCGAGCTGTACTCGAAGTAA
PROTEIN sequence
Length: 210
MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQKPGQHGATARKGKLSDYATQLREKQKVKRIYGLLERQFRNYYKKASTKKGNTGENLLQLLETRLDNVVYRMGFAVTRPAARQLVSHRGVTVNGKSVNLASYQVKAGDAIALSEKAAKQLRVQEALTIAEQHDLSPSWVEVDSKKFSGVFKAVPDRADLPADINEALIVELYSK*