ggKbase home page

SCNpilot_cont_500_bf_scaffold_25105_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 737..1735

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 332.0
  • Bit_score: 635
  • Evalue 3.60e-179
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 332.0
  • Bit_score: 634
  • Evalue 1.40e-179
  • rbh
DNA-directed RNA polymerase subunit alpha n=1 Tax=Xanthomonadaceae RepID=UPI00029B01BE similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 332.0
  • Bit_score: 636
  • Evalue 2.00e-179
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGACGGTTACCGCCAACCAGGTTCTGCGTCCCCGCGGTCCGCAGATCGAACGCCTTACCGACACCCGCGCCAAGGTCGTTATCGAGCCCTTGGAGCGGGGTTACGGGCATACGCTGGGCAATGCCCTGCGTCGCGTGCTGCTGTCGTCCATCCCGGGCTTCGCCATCACGGAAGTCGAGATCGACGGCGTGCTGCATGAGTACACCACGGTCGAAGGGCTGCAGGAGGACGTGCTCGAAGTCCTGCTCAACCTGAAGGACGTGGCCATCCGCATGCATTCCGGTGACAGTGCCACCATCTCCCTGTCCAAGCAGGGTCCGGGTGTGGTGACTGCCGCCGACATCAAGGTCGACCACAACGTCGAAGTCCTCAACGGCGAGCAGATCATCTGCAACCTGACCAAGGACACGGCGATCAACATGCGCCTGAAGGTCGAGCGTGGCTTCGGCTACCAGCCGGCGGCTTCGCGTCGTCGTCCGGACGAAGAAACCCGTGCCATCGGCCGCCTGGTCCTGGACGCCTCGTTCTCGCCGGTCCGCCGCGTCGCCTACGCCGTGGAAGCGGCCCGCGTCGAACAGCGCACCGACCTGGACAAGCTGGTCATCGATATCGAAACCAACGGCACGATCGATGCCGAGGAAGCCGTCCGCACCGCGGCCGACATCCTCAGCGATCAGCTCTCGGTGTTCGGTGACTTCACCCACCGCGACCGCGGTGCGGCCAAGCCGGCCAACAACGGCGTGGATCCGGTGCTGCTGCGCCCGATCGACGACCTGGAGCTGACCGTCCGTTCGGCCAACTGCCTGAAGGCCGAAAGCATCTACTACATCGGCGATCTGATCCAGAAGACCGAAGTGGAGCTGCTCAAGACCCCGAACCTCGGCAAGAAGTCGCTGACCGAGATCAAGGAAGTGCTGGCCCAGCGTGGCCTGTCGCTCGGCATGAAGCTGGAGAACTGGCCGCCGGCCGGCGTCTCCGCCCACGGCATGCTGGGCTGA
PROTEIN sequence
Length: 333
MTVTANQVLRPRGPQIERLTDTRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVEIDGVLHEYTTVEGLQEDVLEVLLNLKDVAIRMHSGDSATISLSKQGPGVVTAADIKVDHNVEVLNGEQIICNLTKDTAINMRLKVERGFGYQPAASRRRPDEETRAIGRLVLDASFSPVRRVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGAAKPANNGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLTEIKEVLAQRGLSLGMKLENWPPAGVSAHGMLG*