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SCNpilot_cont_500_bf_scaffold_40224_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 2..673

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 222.0
  • Bit_score: 386
  • Evalue 5.80e-105
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 226.0
  • Bit_score: 386
  • Evalue 2.60e-104
2-isopropylmalate synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031DCE22 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 223.0
  • Bit_score: 388
  • Evalue 3.70e-105

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
GGCGCCAACGCGTTCGCGCACGAGTCGGGCATCCACCAGCACGGCATGCTGCGCAACCGCAACACCTACGAAATCATGCGCCCGGAAGACGTGGGCTGGGAGTCCTCGCAGATGGTGCTGGGCCGCCACAGCGGCCGCGCCGCGGTCGAGGCGCGCCTGCGTGCGCTGGGCTACTGGCTGGAAGAGGAAGAGCTGAAGCTGGTGTTCGACCAGTTCAAGGCGCTGTGCGAGCAGCAGCGCGTGGTTACCGACGCCGACCTGCAGACCCTGATGCAGGGCAATTCCGGTGGCGACGGCTACCGCCTGGCGTCGATGACCATCAGCGACGTCGGCAGCCGCGCCAACGCACTGGTCGAACTGTCCGACCCGGAAGGCAACCGCGTGGCCGAGACCGCGCAGGGCGACGGCCCGGTGGATGCGCTGTTCTCGGCGCTGTCGGCCGCCACCGGCGTGCAGCTGACGTTGGACAGCTACCACGTGCACAGCGTCGGCATCGGCGCCGACGCGCGCGGCGAGGCCAACCTGGGCGTGCGTCACGAGGGCAACATCTACGAGGGCACCGGCACCAGCCGTGACATCATCGAGGCCAGCGCGCTGGCCTGGCTGGACGTCACCAACCGCCTGCTGCGCCAGCGCGAAGGCAGCAAGACCCAGGAAGCCGTCAGCGCCTGA
PROTEIN sequence
Length: 224
GANAFAHESGIHQHGMLRNRNTYEIMRPEDVGWESSQMVLGRHSGRAAVEARLRALGYWLEEEELKLVFDQFKALCEQQRVVTDADLQTLMQGNSGGDGYRLASMTISDVGSRANALVELSDPEGNRVAETAQGDGPVDALFSALSAATGVQLTLDSYHVHSVGIGADARGEANLGVRHEGNIYEGTGTSRDIIEASALAWLDVTNRLLRQREGSKTQEAVSA*