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SCNpilot_cont_500_bf_scaffold_40224_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 712..1557

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 282.0
  • Bit_score: 521
  • Evalue 1.50e-145
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 282.0
  • Bit_score: 521
  • Evalue 6.50e-145
isopropylmalate isomerase n=1 Tax=Pseudomonas geniculata RepID=UPI00029B4F32 similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 282.0
  • Bit_score: 523
  • Evalue 1.20e-145

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGAGCTCCGCACCCAAGACCCTGTACGACAAACTGTGGGACGCGCATGTCGTCGTCCCCGAAAGCGACAGCGCCCCGGCCGTGCTGTACATCGACCTGCACCTGATCCACGAGGTCACCTCGCCGCAGGCGTTCACCGAACTGCGCGAACGCGGCCTCAGCCCGCGCCGCCCGGACCGCACCAAGGCGACGATGGACCACTCCACCCCGACCCTGCCGGCCGCTGCCGACGGCAAGCTGCCGTATGCGAGCAAGGCCTCCGAGGCGCAGGTGCAGATGCTGGCCCGGAACTGCGCCGAGTACGGCATCGAACTGTTCGACATGGCCTCAAGCAGCCGCGGCATCGTCCACGTCATCGCCCCCGAGCAGGGCTTCACCCAGCCGGGCATGACGATTGTCTGTGGCGACAGCCACACCTCCACCCATGGCGCGTTCGGTGCGCTGGCCTTCGGCATCGGCACCAGCGAAGTGGGCCACGTGCTGGCCACGCAGTGCCTGCTGCAGCGCAAGGCCAGGACCATGTCGATCACCGTCGACGGCGAACTGGCACCGGGCGTCGGCGCCAAGGACGTGGTGCTGCACATCATCGGCGTGATCGGGGTCAACGGCGGCACCGGCCACGTGCTGGAATTCCGCGGTTCCACCATTGCCGCGATGGACATGGAACAGCGCATGACCCTGTGCAACATGTCCATCGAGGCCGGCGCCCGCGCCGGCATGGTGGCACCGGACCAGACCACCTTCGACTGGGTCGCCCGCACCCCGCGTGGCCCGAAGGGCGCCGACTTCGACAAAGCGGTCGCCTACTGGAAGACGCTGCGCAGCGACTACGGCGCGCGCTTCGAC
PROTEIN sequence
Length: 282
MSSAPKTLYDKLWDAHVVVPESDSAPAVLYIDLHLIHEVTSPQAFTELRERGLSPRRPDRTKATMDHSTPTLPAAADGKLPYASKASEAQVQMLARNCAEYGIELFDMASSSRGIVHVIAPEQGFTQPGMTIVCGDSHTSTHGAFGALAFGIGTSEVGHVLATQCLLQRKARTMSITVDGELAPGVGAKDVVLHIIGVIGVNGGTGHVLEFRGSTIAAMDMEQRMTLCNMSIEAGARAGMVAPDQTTFDWVARTPRGPKGADFDKAVAYWKTLRSDYGARFD