ggKbase home page

SCNpilot_cont_500_bf_scaffold_62149_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(2..316)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 107.0
  • Bit_score: 143
  • Evalue 1.40e-31
ribonuclease H (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 107.0
  • Bit_score: 141
  • Evalue 1.50e-31
Ribonuclease HII n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CWU0_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 107.0
  • Bit_score: 143
  • Evalue 9.70e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGAGCCGGCCCCCGGCCGCAACGCTGGCCCTGTTCGACGACGGCCTGCTGGCCGCCCGCCAGGGCCCGCGCCTGACCGCCGGCGTGGACGAGGCCGGACGCGGCCCGCTGGCCGGCCCGGTGGCGGTGGCCGCGGTGGTGTTCGACCCGCAGCGGCCGCGCATCAACGGCCTGGACGACTCCAAGGCGCTCACCGCCGCGCGCCGCGAACAGCTCTTCGAGCGTATCGTCGAGCGCGCCCTGGCCCACAGCATCGTGCTGGTGGACGTGGCCGAGATCGACGACATCAACATCTTCCAGGCCACCATGCAGGGC
PROTEIN sequence
Length: 105
MSRPPAATLALFDDGLLAARQGPRLTAGVDEAGRGPLAGPVAVAAVVFDPQRPRINGLDDSKALTAARREQLFERIVERALAHSIVLVDVAEIDDINIFQATMQG