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SCNpilot_cont_500_bf_scaffold_62149_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(313..1083)

Top 3 Functional Annotations

Value Algorithm Source
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 256.0
  • Bit_score: 396
  • Evalue 3.70e-107
lpxB; Lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 254.0
  • Bit_score: 381
  • Evalue 2.10e-103
lipid-A-disaccharide synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D39667 similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 254.0
  • Bit_score: 391
  • Evalue 5.00e-106

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
GCCGAGACGATCGGCGGCAGCGCCGACATGGTGCTGTGCCTGTTCCCGATGGAGCCGCCGATCTACGCGCGCCATGGCGTCGACGCGCGCTTCGTCGGCCACCCCATGGCCGATGCGATCGCGCTGGACAGCGACCGTGCCGATGCCCGCACCCGGCTGGCGCTGCCGGCCACCGCGCCGGTGCTGGCGGTGTTGCCGGGCAGCCGCCTGGGCGAGGTCGGCCGGCTTGGCCCGGCGTTCTTCGAGGCCGCCTGGCAGGTGGCCGAGCGCATGCCCGGGCTGCATATCGTGGTACCGGCGGCCAATGCCCGCTGCCGGCAGCTGCTCGACCAGCAGATCGCCGCCTCGGCGCTGCCGGCCGCGCGCCTGCACGTGCTCGATGGCCAGGCCCGCGACGCGCTGACCGCCGCCGACGTGGTGCTGCTGGCGTCGGGCACCGCCACCCTGGAGACCATGCTGGTCAAGCGGCCGATGGTGGTCGGCTACCGCGTGTCGGAACTGACCTACCGCATCGCCCGCGCGCTGAAACTGGTCAAGGTCGACCGCTACGCCCTGCCCAACGTGCTGGCCGGGCGCGACCTGGCGCCGGAACTGATCCAGCACGACTGCACGCCGGACCGGCTGGCCGCGGCCGTACTGCGGTGGTTCCAGCACCCCGGCCACGTGCCCGGGTTGCAGGACGACTACCGGCGCCTGCACCTGCAGTTGCGCCAGGACGCCTCGGCCCGCGCCGCCGACGCGGTGGCGTCGCTGCTGGCGCGACCCGCATGA
PROTEIN sequence
Length: 257
AETIGGSADMVLCLFPMEPPIYARHGVDARFVGHPMADAIALDSDRADARTRLALPATAPVLAVLPGSRLGEVGRLGPAFFEAAWQVAERMPGLHIVVPAANARCRQLLDQQIAASALPAARLHVLDGQARDALTAADVVLLASGTATLETMLVKRPMVVGYRVSELTYRIARALKLVKVDRYALPNVLAGRDLAPELIQHDCTPDRLAAAVLRWFQHPGHVPGLQDDYRRLHLQLRQDASARAADAVASLLARPA*