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SCNpilot_cont_500_bf_scaffold_18648

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_18648_1
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..340
DNA (339bp) protein (113aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003664D8F
Aldehyde dehydrogenase {ECO:0000313|EMBL:AHD00084.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohalidivorans DSM 14336.;"
SCNpilot_cont_500_bf_scaffold_18648_2
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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346..1341
DNA (996bp) protein (332aa)
Microsomal dipeptidase {ECO:0000313|EMBL:EPX81756.1}; EC=3.4.13.19 {ECO:0000313|EMBL:EPX81756.1};; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="Litoreibacter arenae DSM 19593.;"
dpep; membrane dipeptidase (EC:3.4.13.19) rbh
Microsomal dipeptidase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QJX1_9RHOB rbh
SCNpilot_cont_500_bf_scaffold_18648_3
unknown

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comp(1473..2249)
DNA (777bp) protein (259aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_18648_4
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2492..2908
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EN29_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA10762.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. CCS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_18648_5
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2905..3474
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BA35_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KIC12182.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-M1.;"
SCNpilot_cont_500_bf_scaffold_18648_6
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3482..4489
DNA (1008bp) protein (336aa)
Malate/L-lactate dehydrogenase family protein n=1 Tax=Roseovarius sp. 217 RepID=A3W1R8_9RHOB rbh
malate/L-lactate dehydrogenase-like protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_cont_500_bf_scaffold_18648_7
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4591..5151
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003714237
QAT familiy ABC transporter, periplasmic substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_cont_500_bf_scaffold_18648_8
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5172..5567
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003714237
glycine betaine-binding periplasmic protein; K02002 glycine betaine/proline transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_cont_500_bf_scaffold_18648_9
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5640..6512
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037A71D2 rbh
binding-protein-dependent transport protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_cont_500_bf_scaffold_18648_10
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6517..7662
DNA (1146bp) protein (382aa)
proV; glycine betaine/L-proline ABC transporter ATP-binding protein; K02000 glycine betaine/proline transport system ATP-binding protein [EC:3.6.3.32]
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000367DA9B rbh
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Displaying 10 items

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