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SCNpilot_cont_500_bf_scaffold_18703

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_18703_1
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..242
DNA (240bp) protein (80aa)
pyridoxamine 5'-phosphate oxidase; K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000255|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; Short=PNPOx {ECO:0000255|HAMAP-Rule:MF_01629};; Pyridoxal 5'-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_01629}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=PDXH_SINMW
SCNpilot_cont_500_bf_scaffold_18703_2
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(340..1341)
DNA (1002bp) protein (334aa)
polysaccharide deacetylase n=1 Tax=Rhizobium meliloti RepID=UPI00037BB5A1 rbh
polysaccharide deacetylase rbh
Uncharacterized protein {ECO:0000313|EMBL:CAC45466.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
SCNpilot_cont_500_bf_scaffold_18703_3
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1421..2059)
DNA (639bp) protein (213aa)
Peptidase TldD n=1 Tax=Rhizobium sp. RepID=L0NBS4_RHISP
Peptidase TldD {ECO:0000313|EMBL:CCF18236.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
tldD; TldD; K03568 TldD protein
SCNpilot_cont_500_bf_scaffold_18703_4
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2023..2721)
DNA (699bp) protein (233aa)
Putative peptidase TldD n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PUB8_9RHIZ
Putative peptidase TldD {ECO:0000313|EMBL:CCM74682.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
tldD; Zn-dependent protease; K03568 TldD protein
SCNpilot_cont_500_bf_scaffold_18703_5
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2850..3431)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3IKX5_9RHIZ
Invasion protein B, involved in pathogenesis {ECO:0000313|EMBL:EJL54623.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
invasion associated locus B (IalB) family protein
SCNpilot_cont_500_bf_scaffold_18703_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3743..4624
DNA (882bp) protein (294aa)
ctaC; cytochrome c oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] rbh
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
cytochrome C oxidase subunit II n=1 Tax=Rhizobium leguminosarum RepID=UPI000376544A rbh
SCNpilot_cont_500_bf_scaffold_18703_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5015..6223
DNA (1209bp) protein (403aa)
coxA; cytochrome c oxidase polypeptide I (cytochrome aa3 subunit 1) (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
cytochrome C oxidase subunit I n=1 Tax=Rhizobium leguminosarum RepID=UPI000375F66C
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:AHF82761.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
SCNpilot_cont_500_bf_scaffold_18703_8
bacterium YEK0313, Bacteria

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6402..7268
DNA (867bp) protein (289aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Protoheme IX farnesyltransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPC0_XANP2
SCNpilot_cont_500_bf_scaffold_18703_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7325..7489
DNA (165bp) protein (55aa)
Protein CoxF n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4A0_STAND
protein CoxF
Protein CoxF {ECO:0000313|EMBL:ADH87920.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_18703_10
unknown

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7533..7649
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 10 items

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