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SCNpilot_cont_500_bf_scaffold_4064

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4064_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..468
DNA (468bp) protein (156aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
argH; argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1]
Argininosuccinate lyase 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGD7_9RHIZ
SCNpilot_cont_500_bf_scaffold_4064_2
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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553..738
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI00036A4891
Uncharacterized protein {ECO:0000313|EMBL:KGD87706.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4064_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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804..2072
DNA (1269bp) protein (423aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
Diaminopimelate decarboxylase n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B5ZRV7_RHILW rbh
SCNpilot_cont_500_bf_scaffold_4064_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2233..4860
DNA (2628bp) protein (876aa)
membrane protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000362ECFF
Membrane protein {ECO:0000313|EMBL:AHF85860.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_4064_5
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5104..5463)
DNA (360bp) protein (120aa)
Two-component response regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JBQ9_AGRRK
two-component response regulator protein
Putative response regulator receiver protein {ECO:0000313|EMBL:GAJ92871.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
SCNpilot_cont_500_bf_scaffold_4064_6
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5639..6187)
DNA (549bp) protein (183aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CCM77511.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CCM77511.1};; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
hpt; Hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PM20_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_4064_7
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6230..6982)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3B8K7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDN55861.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4064_8
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7139..7798
DNA (660bp) protein (220aa)
cell division ATP-binding protein FtsE (EC:3.6.3.31); K09812 cell division transport system ATP-binding protein
Cell division ATP-binding protein FtsE n=1 Tax=Rhizobium sp. CF142 RepID=J2KXW3_9RHIZ
Cell division protein FtsE {ECO:0000313|EMBL:KEQ10126.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
SCNpilot_cont_500_bf_scaffold_4064_9
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7791..8834
DNA (1044bp) protein (348aa)
Cell division protein n=1 Tax=Rhizobium sp. CF080 RepID=J2ICH2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EUB97572.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
ftsX; cell division protein; K09811 cell division transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_4064_10
unknown

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8883..9002
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 10 items

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