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SCNpilot_cont_500_bf_scaffold_4245

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4245_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..898)
DNA (897bp) protein (299aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00037257D9
SCNpilot_cont_500_bf_scaffold_4245_2
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1048..1413)
DNA (366bp) protein (122aa)
Transcriptional regulator n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JXU9_AGRVS
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ACM34979.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_4245_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1410..1961)
DNA (552bp) protein (184aa)
DNA repair protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000367E0A1
DNA repair protein {ECO:0000313|EMBL:AHF86229.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
Smr/MutS family DNA repair protein
SCNpilot_cont_500_bf_scaffold_4245_4
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1966..3084)
DNA (1119bp) protein (373aa)
Membrane-bound lytic murein transglycosylase n=1 Tax=Rhizobium sp. AP16 RepID=J2WDV8_9RHIZ
Putative membrane-bound lytic murein transglycosylase A {ECO:0000313|EMBL:GAJ95693.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
membrane-bound lytic murein transglycosylase
SCNpilot_cont_500_bf_scaffold_4245_5
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3081..3788)
DNA (708bp) protein (236aa)
calcium-binding protein n=1 Tax=Rhizobium sp. JGI 0001005-H05 RepID=UPI000363216E
Putative translocase transmembrane protein {ECO:0000313|EMBL:CDM55699.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4245_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3922..4428
DNA (507bp) protein (169aa)
FxsA cytoplasmic membrane protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LH90_RHITR
FxsA cytoplasmic membrane protein
FxsA cytoplasmic membrane protein {ECO:0000313|EMBL:AGB69440.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_4245_7
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4543..5001
DNA (459bp) protein (153aa)
Protein-export protein SecB n=1 Tax=Rhizobium sp. CF080 RepID=J2TML4_9RHIZ
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
secB; preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB
SCNpilot_cont_500_bf_scaffold_4245_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5073..5774)
DNA (702bp) protein (234aa)
DNA polymerase III subunit epsilon; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] rbh
DNA polymerase III, epsilon subunit n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BQV9_RHILV rbh
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EJC68725.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
SCNpilot_cont_500_bf_scaffold_4245_9
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5776..6378)
DNA (603bp) protein (201aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376, ECO:0000313|EMBL:CDN56309.1}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Dephospho-CoA kinase n=1 Tax=Rhizobium sp. RepID=L0NL69_RHISP
coaE; dephospho-CoA kinase
SCNpilot_cont_500_bf_scaffold_4245_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6375..7229)
DNA (855bp) protein (285aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Shikimate dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFH6_RHITR
aroE; shikimate 5-dehydrogenase
SCNpilot_cont_500_bf_scaffold_4245_11
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7222..7824)
DNA (603bp) protein (201aa)
Maf-like protein REMIM1_CH00002 n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RS36_RHIET
Maf-like protein FA04_17455 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
Maf-like protein
SCNpilot_cont_500_bf_scaffold_4245_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7861..8703)
DNA (843bp) protein (281aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.4.27 {ECO:0000256|HAMAP-Rule:MF_00921};; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
Putative pyruvate, phosphate dikinase regulatory protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CQB9_RHILT
hypothetical protein; K09773 hypothetical protein
Displaying 12 items

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