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SCNpilot_cont_500_bf_scaffold_4314

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4314_1
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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160..585
DNA (426bp) protein (142aa)
30S ribosomal protein S21 n=1 Tax=Rhizobium mongolense RepID=UPI0003B34BED
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
SCNpilot_cont_500_bf_scaffold_4314_2
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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723..1595
DNA (873bp) protein (291aa)
O-linked GlcNAc transferase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q192_9RHIZ rbh
O-linked GlcNAc transferase {ECO:0000313|EMBL:EKF58835.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
O-linked GlcNAc transferase
SCNpilot_cont_500_bf_scaffold_4314_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1730..1954)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000374B360
Strain MEJ076 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ03080.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4314_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2133..2384)
DNA (252bp) protein (84aa)
Putative membrane protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0C9H7_RHILT
Putative membrane protein {ECO:0000313|EMBL:EJC79692.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4314_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2562..3215
DNA (654bp) protein (218aa)
C4-dicarboxylate ABC transporter n=1 Tax=Rhizobium leguminosarum RepID=UPI0003656A35
transmembrane transporter component
Putative transmembrane transporter component {ECO:0000313|EMBL:CAK09629.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_500_bf_scaffold_4314_6
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3243..4799
DNA (1557bp) protein (519aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I7D9_9RHIZ rbh
Putative TRAP transporter large permease protein HI0050 {ECO:0000313|EMBL:CDM59263.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
TRAP family transmembrane transporter protein rbh
SCNpilot_cont_500_bf_scaffold_4314_7
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4849..5334)
DNA (486bp) protein (162aa)
nodulation protein NodN n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000374BF1A
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:EPE95327.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
nodN; nodulation protein NodN
SCNpilot_cont_500_bf_scaffold_4314_8
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5364..7325)
DNA (1962bp) protein (654aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
glycogen debranching protein GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-]
glycogen-debranching protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B772B2 rbh
SCNpilot_cont_500_bf_scaffold_4314_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7348..8460)
DNA (1113bp) protein (371aa)
Phosphoglucomutase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQP6_RHITR
pgm; phosphoglucomutase
Phosphoglucomutase {ECO:0000313|EMBL:AGB72435.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_4314_10
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8907..9416)
DNA (510bp) protein (170aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
glgA; glycogen synthase (EC:2.4.1.21); K00703 starch synthase [EC:2.4.1.21]
glycogen synthase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037CA318
Displaying 10 items

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