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SCNpilot_cont_500_bf_scaffold_4388

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4388_1
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..145)
DNA (144bp) protein (48aa)
Electron transfer flavoprotein, beta subunit n=1 Tax=Rhizobium sp. CF122 RepID=J2R9V9_9RHIZ
etfS; electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:EJL49432.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
SCNpilot_cont_500_bf_scaffold_4388_2
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(189..791)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036CAB60
Putative transcriptional regulator protein {ECO:0000313|EMBL:CDN52327.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_4388_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(794..2830)
DNA (2037bp) protein (679aa)
Putative N-methylproline demethylase StcD {ECO:0000313|EMBL:EYR82169.1}; EC=1.-.-.- {ECO:0000313|EMBL:EYR82169.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
stcD; N-methylproline demethylase; K00540 [EC:1.-.-.-] rbh
Putative N-methylproline demethylase StcD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVK6_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_4388_4
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2977..3606
DNA (630bp) protein (210aa)
Putative TetR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLF0_9RHIZ rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KDP72599.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
putative TetR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_4388_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3725..4519
DNA (795bp) protein (265aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
Pyrroline-5-carboxylate reductase n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0UTV0_RHILV rbh
proC; pyrroline-5-carboxylate reductase rbh
SCNpilot_cont_500_bf_scaffold_4388_6
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4593..5594
DNA (1002bp) protein (334aa)
Putative glycine betaine/L-proline ABC transporter, substrate-binding protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X5M7_RHIFR rbh
glycine betaine-binding periplasmic protein; K02002 glycine betaine/proline transport system substrate-binding protein rbh
Putative glycine betaine/L-proline ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AFL51183.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_500_bf_scaffold_4388_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5699..6586
DNA (888bp) protein (296aa)
ABC-type proline/glycine betaine transport system, permease component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CY81_RHILT rbh
ABC-type proline/glycine betaine transport system, permease component {ECO:0000313|EMBL:EJC84950.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
glycine betaine/L-proline ABC transporter permease protein rbh
SCNpilot_cont_500_bf_scaffold_4388_8
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6579..7640
DNA (1062bp) protein (354aa)
glycine betaine/L-proline ABC transporter ATP-binding protein (EC:3.6.3.32) rbh
Glycine betaine/L-proline ABC transporter ATP-binding protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SFV1_RHIET rbh
Glycine/betaine ABC transporter ATPase {ECO:0000313|EMBL:KDP72595.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_cont_500_bf_scaffold_4388_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7738..8511
DNA (774bp) protein (258aa)
stcD1; N-methylproline demethylase StcD (EC:1.-.-.-)
Putative N-methylproline demethylase StcD n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HUD6_9RHIZ
Oxidoreductase {ECO:0000313|EMBL:KDP72594.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
Displaying 9 items

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