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SCNpilot_cont_500_bf_scaffold_4728

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4728_1
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(87..311)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037FAA6E
Uncharacterized protein {ECO:0000313|EMBL:KGD95648.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4728_2
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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439..1413
DNA (975bp) protein (325aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
htpx; heat shock protein HtpX; K03799 heat shock protein HtpX [EC:3.4.24.-] rbh
Protease HtpX homolog n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5J6Q9_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_4728_3
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1365..2813
DNA (1449bp) protein (483aa)
Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQV5_RHITR
MFS transporter {ECO:0000313|EMBL:KDP72436.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
putative ribosomal RNA small subunit methyltransferase B
SCNpilot_cont_500_bf_scaffold_4728_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2949..4628
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JEV0_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM28519.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_cont_500_bf_scaffold_4728_5
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4716..6332
DNA (1617bp) protein (539aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Rhizobium sp. CF080 RepID=J3BUA6_9RHIZ rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_cont_500_bf_scaffold_4728_6
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6379..7767)
DNA (1389bp) protein (463aa)
Major facilitator superfamily permease n=2 Tax=Rhizobium/Agrobacterium group RepID=J2CUN7_9RHIZ
hypothetical protein; K06902 MFS transporter, UMF1 family
Major facilitator superfamily permease {ECO:0000313|EMBL:EJK80854.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_cont_500_bf_scaffold_4728_7
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7987..8733
DNA (747bp) protein (249aa)
phosphatidic acid phosphatase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000361ECDA
PAP2 superfamily protein {ECO:0000313|EMBL:EJL54018.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
lpxE; lipid A 1'-phosphatase
SCNpilot_cont_500_bf_scaffold_4728_8
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8809..10689)
DNA (1881bp) protein (627aa)
MFS transporter n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI000372D028 rbh
MFS permease {ECO:0000313|EMBL:EGL65314.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
mtbA; sugar MFS permease rbh
SCNpilot_cont_500_bf_scaffold_4728_9
unknown

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10989..11108
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4728_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11220..12245
DNA (1026bp) protein (342aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
aspartate-semialdehyde dehydrogenase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000368276B
asd; aspartate-semialdehyde dehydrogenase
SCNpilot_cont_500_bf_scaffold_4728_11
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12470..13318
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037F447E rbh
Membrane-bound lytic murein transglycosylase {ECO:0000313|EMBL:KEC73088.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
putative lytic murein transglycosylase rbh
SCNpilot_cont_500_bf_scaffold_4728_12
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13387..13551)
DNA (165bp) protein (55aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase n=1 Tax=Rhizobium sp. RepID=L0NKA1_RHISP
SCNpilot_cont_500_bf_scaffold_4728_13
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14095..14925)
DNA (831bp) protein (277aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
pdxY; pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal kinase n=1 Tax=Rhizobium sp. CF080 RepID=J3BTF9_9RHIZ rbh
Displaying 13 items

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