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SCNpilot_cont_500_bf_scaffold_4868

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4868_1
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..224)
DNA (222bp) protein (74aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu
purF; amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
amidophosphoribosyltransferase n=1 Tax=Rhizobium mongolense RepID=UPI0003B2EEDB
SCNpilot_cont_500_bf_scaffold_4868_2
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(371..934)
DNA (564bp) protein (188aa)
Colicin V production protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FAD5_9RHIZ
Colicin V production protein {ECO:0000313|EMBL:EHS50209.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
cvpA; colicin V production protein; K03558 membrane protein required for colicin V production
SCNpilot_cont_500_bf_scaffold_4868_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1093..2496)
DNA (1404bp) protein (468aa)
DNA repair protein RadA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EMG6_9RHIZ
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
radA; DNA repair protein RadA
SCNpilot_cont_500_bf_scaffold_4868_4
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2572..3732)
DNA (1161bp) protein (387aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
alr; alanine racemase; K01775 alanine racemase [EC:5.1.1.1] rbh
Alanine racemase n=1 Tax=Rhizobium sp. CF080 RepID=J2S494_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_4868_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3839..4702
DNA (864bp) protein (288aa)
Transcriptional regulator, AraC family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHB7_RHITR rbh
transcriptional regulator, AraC family rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGB70617.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_4868_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4788..5501
DNA (714bp) protein (238aa)
Branched-chain amino acid transporter protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LGW8_RHITR rbh
branched-chain amino acid transporter protein rbh
Branched-chain amino acid transporter protein {ECO:0000313|EMBL:AGB70618.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_4868_7
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5498..5800
DNA (303bp) protein (101aa)
Putative membrane protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CG29_9RHIZ
Branched-chain amino acid transporter AzlD-like protein {ECO:0000313|EMBL:AIC30650.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4868_8
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5813..7306)
DNA (1494bp) protein (498aa)
dnaB; replicative DNA helicase (EC:3.6.4.12)
Replicative DNA helicase {ECO:0000313|EMBL:AGS21279.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AGS21279.1};; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
DNA helicase protein n=3 Tax=Rhizobium etli RepID=Q2KA97_RHIEC
SCNpilot_cont_500_bf_scaffold_4868_9
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7589..8044
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=6 Tax=Rhizobium meliloti RepID=F6BQU4_SINMB
MarR family transcriptional regulator; K06075 MarR family transcriptional regulator, transcriptional regulator for hemolysin
Transcriptional regulator {ECO:0000313|EMBL:AEH79785.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_cont_500_bf_scaffold_4868_10
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8041..9621
DNA (1581bp) protein (527aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JCB4_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJK85130.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_cont_500_bf_scaffold_4868_11
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9630..10694
DNA (1065bp) protein (355aa)
Multidrug resistance efflux system protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JCB5_AGRRK
multidrug resistance efflux system protein
Multidrug resistance efflux pump {ECO:0000313|EMBL:EJK85129.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_cont_500_bf_scaffold_4868_12
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10765..11340)
DNA (576bp) protein (192aa)
50S ribosomal protein L9 n=2 Tax=Rhizobium RepID=U4PS98_9RHIZ rbh
50S ribosomal protein L9 rbh
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
SCNpilot_cont_500_bf_scaffold_4868_13
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11365..12339)
DNA (975bp) protein (325aa)
membrane protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI0003798489 rbh
Putative transmembrane protein {ECO:0000313|EMBL:EGE55229.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_4868_14
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12481..12729)
DNA (249bp) protein (83aa)
30S ribosomal protein S18 n=3 Tax=Rhizobium fredii RepID=RS18_RHISN
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
SCNpilot_cont_500_bf_scaffold_4868_15
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12742..13137)
DNA (396bp) protein (132aa)
30S ribosomal protein S6 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHC6_RHITR
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
30S ribosomal protein S6
SCNpilot_cont_500_bf_scaffold_4868_16
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13388..13897)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Rhizobium radiobacter RepID=UPI00035C4335
Uncharacterized protein {ECO:0000313|EMBL:EPR19121.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4868_17
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13915..14886)
DNA (972bp) protein (324aa)
Aldo/keto reductase n=1 Tax=Rhizobium sp. Pop5 RepID=K0W0F4_9RHIZ
Aldo/keto reductase {ECO:0000313|EMBL:EJZ23075.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
aldo/keto reductase
Displaying 17 items

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